RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 MON2Q7Z3U7 1717 aa26.02■■□□□ 1.76
LMNA-204ENST00000368298 PHF23Q9BUL5 403 aaPredicted RBP26.02■■□□□ 1.76
LMNA-204ENST00000368298 TERF2IPQ9NYB0 399 aa26.02■■□□□ 1.76
LMNA-204ENST00000368298 LRP6O75581 1613 aa26.02■■□□□ 1.76
LMNA-204ENST00000368298 PAK3O75914 559 aaPredicted RBP26.01■■□□□ 1.75
LMNA-204ENST00000368298 KTN1Q86UP2 1357 aaKnown RBP26■■□□□ 1.75
LMNA-204ENST00000368298 HDGFL2Q7Z4V5 671 aaPredicted RBP26■■□□□ 1.75
LMNA-204ENST00000368298 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
LMNA-204ENST00000368298 MYOM1P52179 1685 aa25.99■■□□□ 1.75
LMNA-204ENST00000368298 A0A1W2PP64 1363 aa25.99■■□□□ 1.75
LMNA-204ENST00000368298 C11orf95C9JLR9 678 aaPredicted RBP25.98■■□□□ 1.75
LMNA-204ENST00000368298 ANKRD36BQ8N2N9 1353 aa25.98■■□□□ 1.75
LMNA-204ENST00000368298 LMOD2Q6P5Q4 547 aa25.98■■□□□ 1.75
LMNA-204ENST00000368298 TTC21BQ7Z4L5 1316 aa25.97■■□□□ 1.75
LMNA-204ENST00000368298 TTC21AQ8NDW8 1320 aa25.96■■□□□ 1.75
LMNA-204ENST00000368298 NUTM2BA6NNL0 878 aaPredicted RBP25.96■■□□□ 1.75
LMNA-204ENST00000368298 NUTM2EB1AL46 878 aaPredicted RBP25.96■■□□□ 1.75
LMNA-204ENST00000368298 NUTM2AQ8IVF1 878 aaPredicted RBP25.96■■□□□ 1.75
LMNA-204ENST00000368298 EDC4Q6P2E9 1401 aaKnown RBP25.96■■□□□ 1.75
LMNA-204ENST00000368298 CRYBG1Q9Y4K1 1723 aa25.95■■□□□ 1.75
LMNA-204ENST00000368298 ABTB2Q8N961 1025 aa25.95■■□□□ 1.74
LMNA-204ENST00000368298 RGS17Q9UGC6 210 aaPredicted RBP25.95■■□□□ 1.74
LMNA-204ENST00000368298 ABCA3Q99758 1704 aa25.95■■□□□ 1.74
LMNA-204ENST00000368298 PIK3C2AO00443 1686 aa25.92■■□□□ 1.74
LMNA-204ENST00000368298 NLRP13Q86W25 1043 aa25.91■■□□□ 1.74
LMNA-204ENST00000368298 CABLES1Q8TDN4 633 aa25.91■■□□□ 1.74
LMNA-204ENST00000368298 MARF1Q9Y4F3 1742 aaKnown RBP25.91■■□□□ 1.74
LMNA-204ENST00000368298 SOCS7O14512 581 aa25.91■■□□□ 1.74
LMNA-204ENST00000368298 USP19O94966 1318 aa25.9■■□□□ 1.74
LMNA-204ENST00000368298 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
LMNA-204ENST00000368298 PHRF1Q9P1Y6 1649 aaKnown RBP25.87■■□□□ 1.73
LMNA-204ENST00000368298 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
LMNA-204ENST00000368298 USP54Q70EL1 1684 aa25.87■■□□□ 1.73
LMNA-204ENST00000368298 MEX3CQ5U5Q3 659 aaKnown RBP25.87■■□□□ 1.73
LMNA-204ENST00000368298 NUTM2GQ5VZR2 741 aa25.87■■□□□ 1.73
LMNA-204ENST00000368298 ADAMTS2O95450 1211 aa25.86■■□□□ 1.73
LMNA-204ENST00000368298 NLRP6P59044 892 aa25.86■■□□□ 1.73
LMNA-204ENST00000368298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.85■■□□□ 1.73
LMNA-204ENST00000368298 POLR3GLQ9BT43 218 aa25.85■■□□□ 1.73
LMNA-204ENST00000368298 HAP1P54257 671 aaPredicted RBP25.85■■□□□ 1.73
LMNA-204ENST00000368298 CARD14Q9BXL6 1004 aa25.85■■□□□ 1.73
LMNA-204ENST00000368298 SLIT3O75094 1523 aa25.84■■□□□ 1.73
LMNA-204ENST00000368298 CCDC7Q96M83 1385 aa25.83■■□□□ 1.73
LMNA-204ENST00000368298 NME9Q86XW9 330 aa25.82■■□□□ 1.72
LMNA-204ENST00000368298 FNBP4Q8N3X1 1017 aaPredicted RBP25.82■■□□□ 1.72
LMNA-204ENST00000368298 WASHC2AQ641Q2 1341 aa25.82■■□□□ 1.72
LMNA-204ENST00000368298 GCP02774 474 aa25.81■■□□□ 1.72
LMNA-204ENST00000368298 C8orf37Q96NL8 207 aa25.81■■□□□ 1.72
LMNA-204ENST00000368298 POTEAQ6S8J7 498 aa25.8■■□□□ 1.72
LMNA-204ENST00000368298 NGLY1Q96IV0 654 aa25.8■■□□□ 1.72
LMNA-204ENST00000368298 PLEKHG5O94827 1062 aa25.79■■□□□ 1.72
LMNA-204ENST00000368298 OVOS2A0A0J9YW53 1432 aa25.79■■□□□ 1.72
LMNA-204ENST00000368298 OVOS2Q6IE36 1432 aa25.79■■□□□ 1.72
LMNA-204ENST00000368298 CPDO75976 1380 aa25.79■■□□□ 1.72
LMNA-204ENST00000368298 PANK3Q9H999 370 aa25.79■■□□□ 1.72
LMNA-204ENST00000368298 AFF2P51816 1311 aa25.78■■□□□ 1.72
LMNA-204ENST00000368298 FYB1O15117 783 aa25.78■■□□□ 1.72
LMNA-204ENST00000368298 KCNH5Q8NCM2 988 aa25.78■■□□□ 1.72
LMNA-204ENST00000368298 ZRANB1Q9UGI0 708 aa25.78■■□□□ 1.72
LMNA-204ENST00000368298 SLIT2O94813 1529 aa25.77■■□□□ 1.72
LMNA-204ENST00000368298 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
LMNA-204ENST00000368298 FAM83GA6ND36 823 aa25.77■■□□□ 1.72
LMNA-204ENST00000368298 ZNF772Q68DY9 489 aaPredicted RBP25.77■■□□□ 1.72
LMNA-204ENST00000368298 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
LMNA-204ENST00000368298 KIAA0232Q92628 1395 aa25.75■■□□□ 1.71
LMNA-204ENST00000368298 BCL9LQ86UU0 1499 aa25.74■■□□□ 1.71
LMNA-204ENST00000368298 KIF20BQ96Q89 1820 aa25.74■■□□□ 1.71
LMNA-204ENST00000368298 NFAT5O94916 1531 aa25.74■■□□□ 1.71
LMNA-204ENST00000368298 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
LMNA-204ENST00000368298 ZC3H6P61129 1189 aaKnown RBP25.73■■□□□ 1.71
LMNA-204ENST00000368298 PLCH1Q4KWH8 1693 aa25.73■■□□□ 1.71
LMNA-204ENST00000368298 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
LMNA-204ENST00000368298 COG3Q96JB2 828 aa25.72■■□□□ 1.71
LMNA-204ENST00000368298 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.72■■□□□ 1.71
LMNA-204ENST00000368298 PRDM11Q9NQV5 511 aa25.72■■□□□ 1.71
LMNA-204ENST00000368298 USP21Q9UK80 565 aa25.72■■□□□ 1.71
LMNA-204ENST00000368298 ARHGEF25Q86VW2 580 aa25.69■■□□□ 1.7
LMNA-204ENST00000368298 UNC5CLQ8IV45 518 aa25.69■■□□□ 1.7
LMNA-204ENST00000368298 GGNBP2Q9H3C7 697 aa25.69■■□□□ 1.7
LMNA-204ENST00000368298 PER1O15534 1290 aaPredicted RBP25.68■■□□□ 1.7
LMNA-204ENST00000368298 LMO7Q8WWI1 1683 aa25.68■■□□□ 1.7
LMNA-204ENST00000368298 AATKQ6ZMQ8 1374 aa25.67■■□□□ 1.7
LMNA-204ENST00000368298 NRAPQ86VF7 1730 aa25.66■■□□□ 1.7
LMNA-204ENST00000368298 COL18A1P39060 1754 aa25.66■■□□□ 1.7
LMNA-204ENST00000368298 CHRNA2Q15822 529 aa25.66■■□□□ 1.7
LMNA-204ENST00000368298 BTG4Q9NY30 223 aa25.66■■□□□ 1.7
LMNA-204ENST00000368298 ATRNO75882 1429 aa25.65■■□□□ 1.7
LMNA-204ENST00000368298 ABCC6O95255 1503 aa25.65■■□□□ 1.7
LMNA-204ENST00000368298 QTRT2Q9H974 415 aaKnown RBP25.65■■□□□ 1.7
LMNA-204ENST00000368298 TRPC5Q9UL62 973 aaPredicted RBP25.65■■□□□ 1.7
LMNA-204ENST00000368298 KNSTRNQ9Y448 316 aa25.65■■□□□ 1.7
LMNA-204ENST00000368298 NSD2O96028 1365 aa25.64■■□□□ 1.7
LMNA-204ENST00000368298 ANKRD26Q9UPS8 1709 aa25.64■■□□□ 1.69
LMNA-204ENST00000368298 CAMTA1Q9Y6Y1 1673 aa25.64■■□□□ 1.69
LMNA-204ENST00000368298 SOX12O15370 315 aa25.62■■□□□ 1.69
LMNA-204ENST00000368298 AMER1Q5JTC6 1135 aaPredicted RBP25.61■■□□□ 1.69
LMNA-204ENST00000368298 LTN1O94822 1766 aa25.61■■□□□ 1.69
LMNA-204ENST00000368298 VPS72Q15906 364 aa25.6■■□□□ 1.69
LMNA-204ENST00000368298 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
LMNA-204ENST00000368298 RBM6P78332 1123 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms