RNA–Protein interactions for RNA: ENST00000368232.8

GPATCH4-201, Transcript of G-patch domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPATCH4, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-201ENST00000368232 PLEKHG3A1L390 1219 aa13.76□□□□□ -0.21
GPATCH4-201ENST00000368232 NEFLP07196 543 aa13.76□□□□□ -0.21
GPATCH4-201ENST00000368232 FKBP8Q14318 412 aa13.76□□□□□ -0.21
GPATCH4-201ENST00000368232 ACEP12821 1306 aa13.76□□□□□ -0.21
GPATCH4-201ENST00000368232 CCDC146Q8IYE0 955 aa13.76□□□□□ -0.21
GPATCH4-201ENST00000368232 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
GPATCH4-201ENST00000368232 NME9Q86XW9 330 aa13.75□□□□□ -0.21
GPATCH4-201ENST00000368232 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
GPATCH4-201ENST00000368232 PDE3BQ13370 1112 aa13.74□□□□□ -0.21
GPATCH4-201ENST00000368232 USP6P35125 1406 aa13.74□□□□□ -0.21
GPATCH4-201ENST00000368232 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
GPATCH4-201ENST00000368232 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
GPATCH4-201ENST00000368232 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
GPATCH4-201ENST00000368232 RBM33Q96EV2 1170 aaKnown RBP13.72□□□□□ -0.21
GPATCH4-201ENST00000368232 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
GPATCH4-201ENST00000368232 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.21
GPATCH4-201ENST00000368232 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
GPATCH4-201ENST00000368232 APAF1O14727 1248 aa13.71□□□□□ -0.21
GPATCH4-201ENST00000368232 FBLN1P23142 703 aa13.71□□□□□ -0.21
GPATCH4-201ENST00000368232 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.21
GPATCH4-201ENST00000368232 COG3Q96JB2 828 aa13.71□□□□□ -0.22
GPATCH4-201ENST00000368232 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
GPATCH4-201ENST00000368232 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
GPATCH4-201ENST00000368232 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
GPATCH4-201ENST00000368232 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
GPATCH4-201ENST00000368232 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
GPATCH4-201ENST00000368232 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
GPATCH4-201ENST00000368232 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 U2AF1L5P0DN76 240 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 U2AF1Q01081 240 aaKnown RBP eCLIP13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 RUNDC1Q96C34 613 aa13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 OVOS2A0A0J9YW53 1432 aa13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 OVOS2Q6IE36 1432 aa13.68□□□□□ -0.22
GPATCH4-201ENST00000368232 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 EMILIN1Q9Y6C2 1016 aa13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
GPATCH4-201ENST00000368232 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
GPATCH4-201ENST00000368232 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
GPATCH4-201ENST00000368232 USP54Q70EL1 1684 aa13.66□□□□□ -0.22
GPATCH4-201ENST00000368232 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
GPATCH4-201ENST00000368232 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
GPATCH4-201ENST00000368232 TCP11L2Q8N4U5 519 aa13.65□□□□□ -0.22
GPATCH4-201ENST00000368232 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
GPATCH4-201ENST00000368232 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
GPATCH4-201ENST00000368232 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
GPATCH4-201ENST00000368232 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
GPATCH4-201ENST00000368232 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
GPATCH4-201ENST00000368232 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
GPATCH4-201ENST00000368232 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
GPATCH4-201ENST00000368232 WWC1Q8IX03 1113 aa13.62□□□□□ -0.23
GPATCH4-201ENST00000368232 PLEKHF1Q96S99 279 aa13.62□□□□□ -0.23
GPATCH4-201ENST00000368232 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
GPATCH4-201ENST00000368232 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
GPATCH4-201ENST00000368232 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 LTN1O94822 1766 aa13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 IL13P35225 146 aa13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
GPATCH4-201ENST00000368232 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
GPATCH4-201ENST00000368232 SOX12O15370 315 aa13.59□□□□□ -0.23
GPATCH4-201ENST00000368232 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
GPATCH4-201ENST00000368232 E9PSI1 815 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 NLRP6P59044 892 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 PNNQ9H307 717 aaKnown RBP13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 RGPD1P0DJD0 1748 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 FCHSD2O94868 740 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
GPATCH4-201ENST00000368232 TRPM3Q9HCF6 1732 aaPredicted RBP13.57□□□□□ -0.24
GPATCH4-201ENST00000368232 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
GPATCH4-201ENST00000368232 MYT1Q01538 1121 aa13.57□□□□□ -0.24
GPATCH4-201ENST00000368232 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
GPATCH4-201ENST00000368232 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
GPATCH4-201ENST00000368232 HMOX1P09601 288 aa13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 PSME1Q06323 249 aa13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
GPATCH4-201ENST00000368232 MAP3K19Q56UN5 1328 aa13.55□□□□□ -0.24
GPATCH4-201ENST00000368232 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms