RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TEX14Q8IWB6 1497 aa14.23□□□□□ -0.13
COPA-202ENST00000368069 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
COPA-202ENST00000368069 HSP90AB4PQ58FF6 505 aa14.22□□□□□ -0.13
COPA-202ENST00000368069 CCDC30Q5VVM6 783 aa14.22□□□□□ -0.13
COPA-202ENST00000368069 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
COPA-202ENST00000368069 NEK4P51957 841 aa14.22□□□□□ -0.13
COPA-202ENST00000368069 IGHDP01880 384 aa14.21□□□□□ -0.13
COPA-202ENST00000368069 G3BP1Q13283 466 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■■■□□ 17.7
COPA-202ENST00000368069 ZNF428Q96B54 188 aa14.21□□□□□ -0.13
COPA-202ENST00000368069 SMC3Q9UQE7 1217 aa14.21□□□□□ -0.13
COPA-202ENST00000368069 MCM4P33991 863 aa14.21□□□□□ -0.13
COPA-202ENST00000368069 NUP160Q12769 1436 aa14.21□□□□□ -0.13
COPA-202ENST00000368069 DDX58O95786 925 aaKnown RBP14.21□□□□□ -0.13
COPA-202ENST00000368069 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
COPA-202ENST00000368069 CAVIN1Q6NZI2 390 aaKnown RBP14.21□□□□□ -0.14
COPA-202ENST00000368069 ARHGEF12Q9NZN5 1544 aa14.21□□□□□ -0.14
COPA-202ENST00000368069 VPS37CA5D8V6 355 aaPredicted RBP14.2□□□□□ -0.14
COPA-202ENST00000368069 K7ELQ4 463 aaPredicted RBP14.2□□□□□ -0.14
COPA-202ENST00000368069 TPM4P67936 248 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 FAM43AQ8N2R8 423 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 SURF6O75683 361 aaKnown RBP14.2□□□□□ -0.14
COPA-202ENST00000368069 GNAI2P04899 355 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 TTC5Q8N0Z6 440 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 ERC2O15083 957 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 SF3A1Q15459 793 aaKnown RBP14.2□□□□□ -0.14
COPA-202ENST00000368069 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 SAMD9Q5K651 1589 aa14.2□□□□□ -0.14
COPA-202ENST00000368069 DUOX2Q9NRD8 1548 aa14.19□□□□□ -0.14
COPA-202ENST00000368069 ABCC11Q96J66 1382 aa14.19□□□□□ -0.14
COPA-202ENST00000368069 FANCAO15360 1455 aa14.19□□□□□ -0.14
COPA-202ENST00000368069 CD109Q6YHK3 1445 aa14.19□□□□□ -0.14
COPA-202ENST00000368069 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
COPA-202ENST00000368069 C14orf93Q9H972 538 aaKnown RBP14.18□□□□□ -0.14
COPA-202ENST00000368069 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
COPA-202ENST00000368069 TRIM27P14373 513 aa14.18□□□□□ -0.14
COPA-202ENST00000368069 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
COPA-202ENST00000368069 PRPF40AO75400 957 aaKnown RBP14.17□□□□□ -0.14
COPA-202ENST00000368069 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
COPA-202ENST00000368069 ABTB2Q8N961 1025 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 MAGI3Q5TCQ9 1506 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 PER1O15534 1290 aaPredicted RBP14.17□□□□□ -0.14
COPA-202ENST00000368069 CCT4P50991 539 aaKnown RBP14.17□□□□□ -0.14
COPA-202ENST00000368069 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 RNF214Q8ND24 703 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 PLCH2O75038 1416 aa14.17□□□□□ -0.14
COPA-202ENST00000368069 DISP1Q96F81 1524 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 IDI1Q13907 227 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 CNTROBQ8N137 903 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 NUDT16Q96DE0 195 aaKnown RBP14.16□□□□□ -0.14
COPA-202ENST00000368069 KDM5BQ9UGL1 1544 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 PLEKHH1Q9ULM0 1364 aa14.16□□□□□ -0.14
COPA-202ENST00000368069 GOLGA6L19H0YKK7 550 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 TBC1D2Q9BYX2 928 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
COPA-202ENST00000368069 MCM2P49736 904 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
COPA-202ENST00000368069 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
COPA-202ENST00000368069 CLASRPQ8N2M8 674 aaKnown RBP14.15□□□□□ -0.14
COPA-202ENST00000368069 NSD2O96028 1365 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 RIC3Q7Z5B4 369 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 LRRCC1Q9C099 1032 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 BECN2A8MW95 431 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 GRPEL1Q9HAV7 217 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 IFT57Q9NWB7 429 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 NME9Q86XW9 330 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
COPA-202ENST00000368069 MBD3O95983 291 aa14.14□□□□□ -0.15
COPA-202ENST00000368069 RPAP2Q8IXW5 612 aaPredicted RBP14.14□□□□□ -0.15
COPA-202ENST00000368069 ADGRL2O95490 1459 aa14.13□□□□□ -0.15
COPA-202ENST00000368069 GCC2Q8IWJ2 1684 aa14.13□□□□□ -0.15
COPA-202ENST00000368069 TULP1O00294 542 aaPredicted RBP14.13□□□□□ -0.15
COPA-202ENST00000368069 RAPGEF4Q8WZA2 1011 aa14.13□□□□□ -0.15
COPA-202ENST00000368069 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
COPA-202ENST00000368069 CWC22Q9HCG8 908 aaKnown RBP14.13□□□□□ -0.15
COPA-202ENST00000368069 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
COPA-202ENST00000368069 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 MCM10Q7L590 875 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 CHMP4CQ96CF2 233 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
COPA-202ENST00000368069 C8orf34Q49A92 452 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
COPA-202ENST00000368069 FAM13BQ9NYF5 915 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 ISY1Q9ULR0 285 aaKnown RBP14.11□□□□□ -0.15
COPA-202ENST00000368069 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
COPA-202ENST00000368069 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 CCDC34Q96HJ3 373 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
COPA-202ENST00000368069 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
COPA-202ENST00000368069 CCDC173Q0VFZ6 552 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms