RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CWC15Q9P013 229 aaKnown RBP9.92□□□□□ -0.82
SHPRH-203ENST00000367505 CCT4P50991 539 aaKnown RBP9.92□□□□□ -0.82
SHPRH-203ENST00000367505 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 ERCC4Q92889 916 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-203ENST00000367505 AK7Q96M32 723 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.825e-10■■■■■ 39.2
SHPRH-203ENST00000367505 APPP05067 770 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC192P0DO97 292 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 NOB1Q9ULX3 412 aaKnown RBP9.91□□□□□ -0.82
SHPRH-203ENST00000367505 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 SLFN5Q08AF3 891 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 TRHP20396 242 aaPredicted RBP9.91□□□□□ -0.82
SHPRH-203ENST00000367505 CHD1LQ86WJ1 897 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
SHPRH-203ENST00000367505 DHX16O60231 1041 aaKnown RBP9.91□□□□□ -0.82
SHPRH-203ENST00000367505 SURF6O75683 361 aaKnown RBP9.9□□□□□ -0.82
SHPRH-203ENST00000367505 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-203ENST00000367505 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
SHPRH-203ENST00000367505 ZNF396Q96N95 335 aaPredicted RBP9.9□□□□□ -0.82
SHPRH-203ENST00000367505 RUFY1Q96T51 708 aa9.9□□□□□ -0.82
SHPRH-203ENST00000367505 XBP1P17861 261 aa9.9□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
SHPRH-203ENST00000367505 NECTIN2Q92692 538 aa9.9□□□□□ -0.83
SHPRH-203ENST00000367505 NOL10Q9BSC4 688 aaKnown RBP9.9□□□□□ -0.83
SHPRH-203ENST00000367505 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
SHPRH-203ENST00000367505 ANKRD30BQ9BXX2 1392 aa9.89□□□□□ -0.83
SHPRH-203ENST00000367505 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
SHPRH-203ENST00000367505 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
SHPRH-203ENST00000367505 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-203ENST00000367505 RPAP2Q8IXW5 612 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-203ENST00000367505 KRT85P78386 507 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 ZSCAN30Q86W11 494 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 JMYQ8N9B5 988 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 CYP46A1Q9Y6A2 500 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 G3V3G9 751 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 RPGRIP1LQ68CZ1 1315 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
SHPRH-203ENST00000367505 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-203ENST00000367505 FIBPO43427 364 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 PSME1Q06323 249 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 NCOA1Q15788 1441 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 ZSCAN31Q96LW9 406 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-203ENST00000367505 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-203ENST00000367505 ABCC11Q96J66 1382 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 FCHSD2O94868 740 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
SHPRH-203ENST00000367505 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
SHPRH-203ENST00000367505 NKTRP30414 1462 aaKnown RBP9.86□□□□□ -0.83
SHPRH-203ENST00000367505 FILIP1LQ4L180 1135 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 SLC12A5Q9H2X9 1139 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 SART3Q15020 963 aaKnown RBP9.86□□□□□ -0.83
SHPRH-203ENST00000367505 SMARCE1Q969G3 411 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 MSH5O43196 834 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 CCDC112Q8NEF3 446 aa9.86□□□□□ -0.83
SHPRH-203ENST00000367505 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
SHPRH-203ENST00000367505 SLC52A1Q9NWF4 448 aa9.85□□□□□ -0.83
SHPRH-203ENST00000367505 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
SHPRH-203ENST00000367505 NEUROD6Q96NK8 337 aa9.85□□□□□ -0.83
SHPRH-203ENST00000367505 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
SHPRH-203ENST00000367505 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
SHPRH-203ENST00000367505 SMC2O95347 1197 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
SHPRH-203ENST00000367505 ALDH1L2Q3SY69 923 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 VPS37DQ86XT2 251 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 CFAP45Q9UL16 551 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 EPRSP07814 1512 aaKnown RBP9.84□□□□□ -0.83
SHPRH-203ENST00000367505 STK38Q15208 465 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 AFAP1Q8N556 730 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 PDILTQ8N807 584 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
SHPRH-203ENST00000367505 DACH1Q9UI36 760 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 EVA1CP58658 441 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 NLRP6P59044 892 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 KRT32Q14532 448 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 PLEKHO1Q53GL0 409 aaPredicted RBP9.83□□□□□ -0.84
SHPRH-203ENST00000367505 LRPPRCP42704 1394 aaKnown RBP9.83□□□□□ -0.84
SHPRH-203ENST00000367505 PTPN23Q9H3S7 1636 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 UQCRHLA0A096LP55 91 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 KIF2AO00139 706 aaPredicted RBP9.83□□□□□ -0.84
SHPRH-203ENST00000367505 UQCRHP07919 91 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 PRG4Q92954 1404 aaPredicted RBP9.83□□□□□ -0.84
SHPRH-203ENST00000367505 GPRASP1Q5JY77 1395 aa9.83□□□□□ -0.84
SHPRH-203ENST00000367505 LARP1BQ659C4 914 aaKnown RBP9.83□□□□□ -0.84
SHPRH-203ENST00000367505 MYO6Q9UM54 1294 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms