RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PDCL3Q9H2J4 239 aa14.73□□□□□ -0.05
TPR-201ENST00000367478 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
TPR-201ENST00000367478 TAX1BP1Q86VP1 789 aa14.73□□□□□ -0.05
TPR-201ENST00000367478 CETN2P41208 172 aa14.73□□□□□ -0.05
TPR-201ENST00000367478 EXOC6Q8TAG9 804 aa14.73□□□□□ -0.05
TPR-201ENST00000367478 WASHC4Q2M389 1173 aa14.73□□□□□ -0.05
TPR-201ENST00000367478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPR-201ENST00000367478 NF2P35240 595 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 MIA2Q96PC5 1412 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
TPR-201ENST00000367478 CENPHQ9H3R5 247 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
TPR-201ENST00000367478 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
TPR-201ENST00000367478 DIAPH1O60610 1272 aaKnown RBP14.72□□□□□ -0.05
TPR-201ENST00000367478 TRIM22Q8IYM9 498 aa14.71□□□□□ -0.05
TPR-201ENST00000367478 BRPF1P55201 1214 aaPredicted RBP14.71□□□□□ -0.05
TPR-201ENST00000367478 STK38Q15208 465 aa14.71□□□□□ -0.05
TPR-201ENST00000367478 ELL2O00472 640 aaPredicted RBP14.71□□□□□ -0.06
TPR-201ENST00000367478 MICALCLQ6ZW33 695 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 IMMTQ16891 758 aaKnown RBP14.7□□□□□ -0.06
TPR-201ENST00000367478 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 CRACR2AQ9BSW2 395 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 CFAP45Q9UL16 551 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 ZNF397Q8NF99 534 aaPredicted RBP14.7□□□□□ -0.06
TPR-201ENST00000367478 CCDC148Q8NFR7 591 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 UBTFL1P0CB47 393 aaPredicted RBP14.7□□□□□ -0.06
TPR-201ENST00000367478 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
TPR-201ENST00000367478 MAP2K1Q02750 393 aaPredicted RBP14.7□□□□□ -0.06
TPR-201ENST00000367478 WDR33Q9C0J8 1336 aaKnown RBP14.7□□□□□ -0.06
TPR-201ENST00000367478 PLIN1O60240 522 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 RIPK4P57078 832 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 CCDC27Q2M243 656 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 TNMDQ9H2S6 317 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 USP47Q96K76 1375 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
TPR-201ENST00000367478 MSH5O43196 834 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 CDKL5O76039 1030 aa14.69□□□□□ -0.06
TPR-201ENST00000367478 GNAI3P08754 354 aa14.68□□□□□ -0.06
TPR-201ENST00000367478 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
TPR-201ENST00000367478 PRKRIP1Q9H875 184 aaPredicted RBP14.68□□□□□ -0.06
TPR-201ENST00000367478 SMTNL1A8MU46 457 aa14.68□□□□□ -0.06
TPR-201ENST00000367478 KRT85P78386 507 aa14.68□□□□□ -0.06
TPR-201ENST00000367478 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■□□□□ 10.2
TPR-201ENST00000367478 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
TPR-201ENST00000367478 FOSBP53539 338 aa14.68□□□□□ -0.06
TPR-201ENST00000367478 STAC3Q96MF2 364 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 RIC3Q7Z5B4 369 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 NEUROD6Q96NK8 337 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 CEP63Q96MT8 703 aa14.67□□□□□ -0.06
TPR-201ENST00000367478 TAF4BQ92750 862 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
TPR-201ENST00000367478 CALCOCO1Q9P1Z2 691 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 FSD1Q9BTV5 496 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 ST20-MTHFSA0A0A6YYL1 179 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
TPR-201ENST00000367478 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 CFAP57Q96MR6 1250 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 ANKRD18BA2A2Z9 1011 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 NOL7Q9UMY1 257 aaKnown RBP14.66□□□□□ -0.06
TPR-201ENST00000367478 CCDC102AQ96A19 550 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 TMCO3Q6UWJ1 677 aa14.66□□□□□ -0.06
TPR-201ENST00000367478 PPP1R12BO60237 982 aaPredicted RBP14.65□□□□□ -0.06
TPR-201ENST00000367478 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 EPB41L2O43491 1005 aaKnown RBP14.65□□□□□ -0.06
TPR-201ENST00000367478 UBXN4Q92575 508 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 GCOM1H8Y6P7 765 aaPredicted RBP14.65□□□□□ -0.06
TPR-201ENST00000367478 MYZAPP0CAP1 466 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 SPC24Q8NBT2 197 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 UQCRHLA0A096LP55 91 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 UQCRHP07919 91 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 SEPT11Q9NVA2 429 aaKnown RBP14.65□□□□□ -0.06
TPR-201ENST00000367478 KIAA1328Q86T90 577 aa14.65□□□□□ -0.06
TPR-201ENST00000367478 NEBLO76041 1014 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 LUZP1Q86V48 1076 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 APAF1O14727 1248 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
TPR-201ENST00000367478 CEP57L1Q8IYX8 460 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 NACAP1Q9BZK3 213 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 ME1P48163 572 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 NEK4P51957 841 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 TANGO6Q9C0B7 1094 aa14.64□□□□□ -0.07
TPR-201ENST00000367478 CCDC57Q2TAC2 916 aa14.63□□□□□ -0.07
TPR-201ENST00000367478 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
TPR-201ENST00000367478 CYP46A1Q9Y6A2 500 aa14.63□□□□□ -0.07
TPR-201ENST00000367478 ZSCAN12O43309 604 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 ARHGAP29Q52LW3 1261 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 CCDC97Q96F63 343 aaPredicted RBP14.62□□□□□ -0.07
TPR-201ENST00000367478 FIBPO43427 364 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 ANAPC15P60006 121 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 VPS36Q86VN1 386 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
TPR-201ENST00000367478 SRCIN1Q9C0H9 1055 aa14.62□□□□□ -0.07
TPR-201ENST00000367478 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms