RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 ZNF511Q8NB15 262 aa13.9□□□□□ -0.18
CFHR3-202ENST00000367427 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
CFHR3-202ENST00000367427 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
CFHR3-202ENST00000367427 VARSP26640 1264 aaKnown RBP13.88□□□□□ -0.19
CFHR3-202ENST00000367427 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
CFHR3-202ENST00000367427 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
CFHR3-202ENST00000367427 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
CFHR3-202ENST00000367427 LYPD8Q6UX82 237 aa13.86□□□□□ -0.19
CFHR3-202ENST00000367427 LORP23490 312 aaPredicted RBP13.85□□□□□ -0.19
CFHR3-202ENST00000367427 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
CFHR3-202ENST00000367427 SLC16A10Q8TF71 515 aa13.85□□□□□ -0.19
CFHR3-202ENST00000367427 TBC1D2Q9BYX2 928 aa13.85□□□□□ -0.19
CFHR3-202ENST00000367427 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
CFHR3-202ENST00000367427 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CFHR3-202ENST00000367427 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
CFHR3-202ENST00000367427 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.2
CFHR3-202ENST00000367427 CFAP99D6REC4 459 aa13.82□□□□□ -0.2
CFHR3-202ENST00000367427 GMPRP36959 345 aa13.82□□□□□ -0.2
CFHR3-202ENST00000367427 NNTQ13423 1086 aa13.82□□□□□ -0.2
CFHR3-202ENST00000367427 SPTLC1O15269 473 aa13.81□□□□□ -0.2
CFHR3-202ENST00000367427 H3BM21 787 aa13.8□□□□□ -0.2
CFHR3-202ENST00000367427 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
CFHR3-202ENST00000367427 F12P00748 615 aaPredicted RBP13.79□□□□□ -0.2
CFHR3-202ENST00000367427 TIMP2P16035 220 aa13.79□□□□□ -0.2
CFHR3-202ENST00000367427 DIXDC1Q155Q3 683 aa13.79□□□□□ -0.2
CFHR3-202ENST00000367427 HRCP23327 699 aa13.78□□□□□ -0.2
CFHR3-202ENST00000367427 VEGFBP49765 207 aa13.78□□□□□ -0.2
CFHR3-202ENST00000367427 IRF7Q92985 503 aa13.78□□□□□ -0.2
CFHR3-202ENST00000367427 CDK15Q96Q40 435 aa13.78□□□□□ -0.2
CFHR3-202ENST00000367427 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
CFHR3-202ENST00000367427 MRPL14Q6P1L8 145 aaKnown RBP13.76□□□□□ -0.21
CFHR3-202ENST00000367427 TRIM66O15016 1216 aa13.75□□□□□ -0.21
CFHR3-202ENST00000367427 CTHP32929 405 aa13.75□□□□□ -0.21
CFHR3-202ENST00000367427 FAM174AQ8TBP5 190 aa13.75□□□□□ -0.21
CFHR3-202ENST00000367427 FOXJ1Q92949 421 aa13.75□□□□□ -0.21
CFHR3-202ENST00000367427 ADH1CP00326 375 aa13.74□□□□□ -0.21
CFHR3-202ENST00000367427 WDR4P57081 412 aaKnown RBP13.74□□□□□ -0.21
CFHR3-202ENST00000367427 PRPF38BQ5VTL8 546 aaKnown RBP13.74□□□□□ -0.21
CFHR3-202ENST00000367427 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
CFHR3-202ENST00000367427 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
CFHR3-202ENST00000367427 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
CFHR3-202ENST00000367427 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
CFHR3-202ENST00000367427 PURBQ96QR8 312 aaKnown RBP13.71□□□□□ -0.21
CFHR3-202ENST00000367427 GRM5P41594 1212 aa13.7□□□□□ -0.22
CFHR3-202ENST00000367427 ZSCAN1Q8NBB4 408 aa13.7□□□□□ -0.22
CFHR3-202ENST00000367427 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
CFHR3-202ENST00000367427 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
CFHR3-202ENST00000367427 SCARF1Q14162 830 aa13.69□□□□□ -0.22
CFHR3-202ENST00000367427 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
CFHR3-202ENST00000367427 NR3C2P08235 984 aa13.67□□□□□ -0.22
CFHR3-202ENST00000367427 SOBPA7XYQ1 873 aa13.66□□□□□ -0.22
CFHR3-202ENST00000367427 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
CFHR3-202ENST00000367427 NR5A1Q13285 461 aa13.66□□□□□ -0.22
CFHR3-202ENST00000367427 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
CFHR3-202ENST00000367427 AK7Q96M32 723 aa13.66□□□□□ -0.22
CFHR3-202ENST00000367427 ZFAND3Q9H8U3 227 aa13.66□□□□□ -0.22
CFHR3-202ENST00000367427 FAM181BA6NEQ2 426 aa13.65□□□□□ -0.22
CFHR3-202ENST00000367427 VSIG8P0DPA2 414 aa13.65□□□□□ -0.22
CFHR3-202ENST00000367427 TUSC1Q2TAM9 212 aa13.65□□□□□ -0.22
CFHR3-202ENST00000367427 ARXQ96QS3 562 aa13.65□□□□□ -0.22
CFHR3-202ENST00000367427 LIMD1Q9UGP4 676 aa13.65□□□□□ -0.22
CFHR3-202ENST00000367427 ZIC2O95409 532 aaPredicted RBP13.64□□□□□ -0.23
CFHR3-202ENST00000367427 ARID5BQ14865 1188 aa13.63□□□□□ -0.23
CFHR3-202ENST00000367427 QPCTQ16769 361 aa13.63□□□□□ -0.23
CFHR3-202ENST00000367427 LILRB3O75022 631 aa13.62□□□□□ -0.23
CFHR3-202ENST00000367427 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
CFHR3-202ENST00000367427 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
CFHR3-202ENST00000367427 BPHLQ86WA6 291 aaPredicted RBP13.62□□□□□ -0.23
CFHR3-202ENST00000367427 C1QTNF2Q9BXJ5 285 aa13.62□□□□□ -0.23
CFHR3-202ENST00000367427 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
CFHR3-202ENST00000367427 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
CFHR3-202ENST00000367427 AGERQ15109 404 aa13.58□□□□□ -0.24
CFHR3-202ENST00000367427 PDE4DQ08499 809 aa13.56□□□□□ -0.24
CFHR3-202ENST00000367427 SH3BP5LQ7L8J4 393 aa13.56□□□□□ -0.24
CFHR3-202ENST00000367427 MEIOBQ8N635 442 aa13.56□□□□□ -0.24
CFHR3-202ENST00000367427 SLC24A3Q9HC58 644 aa13.56□□□□□ -0.24
CFHR3-202ENST00000367427 C6orf118Q5T5N4 469 aa13.55□□□□□ -0.24
CFHR3-202ENST00000367427 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
CFHR3-202ENST00000367427 ARMC2Q8NEN0 867 aa13.55□□□□□ -0.24
CFHR3-202ENST00000367427 MAP4K5Q9Y4K4 846 aa13.55□□□□□ -0.24
CFHR3-202ENST00000367427 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
CFHR3-202ENST00000367427 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
CFHR3-202ENST00000367427 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
CFHR3-202ENST00000367427 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
CFHR3-202ENST00000367427 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
CFHR3-202ENST00000367427 LINC00528Q8N1L1 170 aa13.53□□□□□ -0.24
CFHR3-202ENST00000367427 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
CFHR3-202ENST00000367427 MAN1A2O60476 641 aa13.52□□□□□ -0.25
CFHR3-202ENST00000367427 PPFIA3O75145 1194 aa13.52□□□□□ -0.25
CFHR3-202ENST00000367427 TSC1Q92574 1164 aa13.52□□□□□ -0.25
CFHR3-202ENST00000367427 BMP2P12643 396 aa13.5□□□□□ -0.25
CFHR3-202ENST00000367427 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
CFHR3-202ENST00000367427 DNMT3LQ9UJW3 386 aa13.49□□□□□ -0.25
CFHR3-202ENST00000367427 FSHRP23945 695 aa13.48□□□□□ -0.25
CFHR3-202ENST00000367427 UPP2O95045 317 aa13.47□□□□□ -0.25
CFHR3-202ENST00000367427 VASH1Q7L8A9 365 aaPredicted RBP13.47□□□□□ -0.25
CFHR3-202ENST00000367427 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
CFHR3-202ENST00000367427 CLK2P49760 499 aaKnown RBP13.45□□□□□ -0.26
CFHR3-202ENST00000367427 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
CFHR3-202ENST00000367427 TSEN34Q9BSV6 310 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms