RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SYAP1Q96A49 352 aaPredicted RBP14.18□□□□□ -0.14
SYNE1-204ENST00000367248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
SYNE1-204ENST00000367248 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
SYNE1-204ENST00000367248 SYNE3Q6ZMZ3 975 aa14.18□□□□□ -0.14
SYNE1-204ENST00000367248 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
SYNE1-204ENST00000367248 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
SYNE1-204ENST00000367248 WASHC4Q2M389 1173 aa14.17□□□□□ -0.14
SYNE1-204ENST00000367248 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
SYNE1-204ENST00000367248 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
SYNE1-204ENST00000367248 RBM5P52756 815 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYNE1-204ENST00000367248 SF3A1Q15459 793 aaKnown RBP14.16□□□□□ -0.14
SYNE1-204ENST00000367248 LNPKQ9C0E8 428 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 HSPA2P54652 639 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
SYNE1-204ENST00000367248 FOSBP53539 338 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 ERC2O15083 957 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 TSR2Q969E8 191 aaKnown RBP14.15□□□□□ -0.14
SYNE1-204ENST00000367248 ANO2Q9NQ90 1003 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 CPLX2Q6PUV4 134 aaKnown RBP14.15□□□□□ -0.14
SYNE1-204ENST00000367248 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
SYNE1-204ENST00000367248 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
SYNE1-204ENST00000367248 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
SYNE1-204ENST00000367248 NFXL1Q6ZNB6 911 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 H3BQV1 296 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
SYNE1-204ENST00000367248 FCHSD2O94868 740 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 KIF14Q15058 1648 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 KIAA2012Q0VF49 1180 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
SYNE1-204ENST00000367248 FAM184AQ8NB25 1140 aa14.13□□□□□ -0.15
SYNE1-204ENST00000367248 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
SYNE1-204ENST00000367248 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
SYNE1-204ENST00000367248 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 WDR63Q8IWG1 891 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 RNF20Q5VTR2 975 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 PLCH2O75038 1416 aa14.12□□□□□ -0.15
SYNE1-204ENST00000367248 GPATCH8Q9UKJ3 1502 aaKnown RBP14.12□□□□□ -0.15
SYNE1-204ENST00000367248 SURF6O75683 361 aaKnown RBP14.11□□□□□ -0.15
SYNE1-204ENST00000367248 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
SYNE1-204ENST00000367248 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
SYNE1-204ENST00000367248 CLASRPQ8N2M8 674 aaKnown RBP14.11□□□□□ -0.15
SYNE1-204ENST00000367248 CHAF1AQ13111 956 aaPredicted RBP14.11□□□□□ -0.15
SYNE1-204ENST00000367248 WASLO00401 505 aaPredicted RBP14.11□□□□□ -0.15
SYNE1-204ENST00000367248 ATP10BO94823 1461 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 TRDNQ13061 729 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
SYNE1-204ENST00000367248 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
SYNE1-204ENST00000367248 ATP6V1DQ9Y5K8 247 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 INTS3Q68E01 1043 aaKnown RBP14.1□□□□□ -0.15
SYNE1-204ENST00000367248 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
SYNE1-204ENST00000367248 DNAJC2Q99543 621 aaKnown RBP14.09□□□□□ -0.15
SYNE1-204ENST00000367248 CCDC43Q96MW1 224 aaKnown RBP14.09□□□□□ -0.15
SYNE1-204ENST00000367248 SRCIN1Q9C0H9 1055 aa14.09□□□□□ -0.15
SYNE1-204ENST00000367248 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
SYNE1-204ENST00000367248 NME9Q86XW9 330 aa14.09□□□□□ -0.15
SYNE1-204ENST00000367248 CPLX1O14810 134 aa14.08□□□□□ -0.16
SYNE1-204ENST00000367248 SIL1Q9H173 461 aa14.08□□□□□ -0.16
SYNE1-204ENST00000367248 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
SYNE1-204ENST00000367248 ERICH2A1L162 156 aa14.08□□□□□ -0.16
SYNE1-204ENST00000367248 NOS1P29475 1434 aa14.08□□□□□ -0.16
SYNE1-204ENST00000367248 MSNP26038 577 aaKnown RBP14.08□□□□□ -0.16
SYNE1-204ENST00000367248 NFE2L2Q16236 605 aa14.07□□□□□ -0.16
SYNE1-204ENST00000367248 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
SYNE1-204ENST00000367248 TPM4P67936 248 aa14.07□□□□□ -0.16
SYNE1-204ENST00000367248 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
SYNE1-204ENST00000367248 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
SYNE1-204ENST00000367248 PTPN23Q9H3S7 1636 aa14.07□□□□□ -0.16
SYNE1-204ENST00000367248 TNRQ92752 1358 aa14.07□□□□□ -0.16
SYNE1-204ENST00000367248 PHF14O94880 888 aa14.06□□□□□ -0.16
SYNE1-204ENST00000367248 CDC45O75419 566 aa14.06□□□□□ -0.16
SYNE1-204ENST00000367248 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
SYNE1-204ENST00000367248 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
SYNE1-204ENST00000367248 BCAR3O75815 825 aa14.06□□□□□ -0.16
SYNE1-204ENST00000367248 GNAI2P04899 355 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 NOC3LQ8WTT2 800 aaKnown RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 NOB1Q9ULX3 412 aaKnown RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 CHRNA2Q15822 529 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 NAP1L5Q96NT1 182 aaPredicted RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 IBSPP21815 317 aaPredicted RBP14.05□□□□□ -0.16
SYNE1-204ENST00000367248 TRIM29Q14134 588 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 FSD1Q9BTV5 496 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
SYNE1-204ENST00000367248 TPD52L1Q16890 204 aaPredicted RBP14.04□□□□□ -0.16
SYNE1-204ENST00000367248 MPHOSPH8Q99549 860 aa14.04□□□□□ -0.16
SYNE1-204ENST00000367248 MIS18AQ9NYP9 233 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms