RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 ABCA6Q8N139 1617 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 EFCAB6Q5THR3 1501 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 GOLGA6L22H0YM25 854 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 HMOX1P09601 288 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
CD46-208ENST00000367042 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
CD46-208ENST00000367042 NEO1Q92859 1461 aa10.23□□□□□ -0.77
CD46-208ENST00000367042 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
CD46-208ENST00000367042 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
CD46-208ENST00000367042 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
CD46-208ENST00000367042 DIAPH1O60610 1272 aaKnown RBP10.21□□□□□ -0.77
CD46-208ENST00000367042 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
CD46-208ENST00000367042 CHD1LQ86WJ1 897 aa10.21□□□□□ -0.77
CD46-208ENST00000367042 GLI2P10070 1586 aa10.21□□□□□ -0.78
CD46-208ENST00000367042 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.78
CD46-208ENST00000367042 KIF16BQ96L93 1317 aa10.21□□□□□ -0.78
CD46-208ENST00000367042 NLRP1Q9C000 1473 aa10.21□□□□□ -0.78
CD46-208ENST00000367042 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
CD46-208ENST00000367042 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
CD46-208ENST00000367042 HDAC1Q13547 482 aaPredicted RBP10.2□□□□□ -0.78
CD46-208ENST00000367042 ESPNB1AK53 854 aa10.2□□□□□ -0.78
CD46-208ENST00000367042 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
CD46-208ENST00000367042 C14orf93Q9H972 538 aaKnown RBP10.2□□□□□ -0.78
CD46-208ENST00000367042 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 TPRNQ4KMQ1 711 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 FOXD4L5Q5VV16 416 aaPredicted RBP10.19□□□□□ -0.78
CD46-208ENST00000367042 FOXD4L4Q8WXT5 416 aaPredicted RBP10.19□□□□□ -0.78
CD46-208ENST00000367042 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 TRIM35Q9UPQ4 493 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 MYOM1P52179 1685 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 IFT172Q9UG01 1749 aa10.19□□□□□ -0.78
CD46-208ENST00000367042 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 ZBTB7CA1YPR0 619 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 VGFO15240 615 aaPredicted RBP10.18□□□□□ -0.78
CD46-208ENST00000367042 SMC5Q8IY18 1101 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 ZBTB40Q9NUA8 1239 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 MROH2AA6NES4 1674 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 SSFA2P28290 1259 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 CLCN1P35523 988 aa10.18□□□□□ -0.78
CD46-208ENST00000367042 HDGFL2Q7Z4V5 671 aaPredicted RBP10.18□□□□□ -0.78
CD46-208ENST00000367042 PHF23Q9BUL5 403 aaPredicted RBP10.18□□□□□ -0.78
CD46-208ENST00000367042 CT47B1P0C2W7 299 aaPredicted RBP10.17□□□□□ -0.78
CD46-208ENST00000367042 NUCB1Q02818 461 aa10.17□□□□□ -0.78
CD46-208ENST00000367042 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
CD46-208ENST00000367042 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
CD46-208ENST00000367042 PRAM1Q96QH2 718 aa10.17□□□□□ -0.78
CD46-208ENST00000367042 KIF1BO60333 1816 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 K7ELQ4 463 aaPredicted RBP10.16□□□□□ -0.78
CD46-208ENST00000367042 MSNP26038 577 aaKnown RBP10.16□□□□□ -0.78
CD46-208ENST00000367042 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 GAS2L3Q86XJ1 694 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 ARID3AQ99856 593 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 DIP2BQ9P265 1576 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
CD46-208ENST00000367042 NASPP49321 788 aaPredicted RBP10.16□□□□□ -0.78
CD46-208ENST00000367042 ABCC3O15438 1527 aa10.15□□□□□ -0.78
CD46-208ENST00000367042 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
CD46-208ENST00000367042 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
CD46-208ENST00000367042 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
CD46-208ENST00000367042 SIGLEC1Q9BZZ2 1709 aa10.15□□□□□ -0.78
CD46-208ENST00000367042 NPATQ14207 1427 aa10.15□□□□□ -0.78
CD46-208ENST00000367042 FYB1O15117 783 aa10.15□□□□□ -0.79
CD46-208ENST00000367042 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.79
CD46-208ENST00000367042 TSPYL6Q8N831 410 aa10.15□□□□□ -0.79
CD46-208ENST00000367042 MYOM2P54296 1465 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 SOX12O15370 315 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 CALD1Q05682 793 aaKnown RBP10.14□□□□□ -0.79
CD46-208ENST00000367042 NOL8Q76FK4 1167 aaKnown RBP10.14□□□□□ -0.79
CD46-208ENST00000367042 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 ADGRB3O60242 1522 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 NRXN1Q9ULB1 1477 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 CAMSAP1Q5T5Y3 1602 aa10.14□□□□□ -0.79
CD46-208ENST00000367042 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
CD46-208ENST00000367042 FOXD4L6Q3SYB3 417 aaPredicted RBP10.13□□□□□ -0.79
CD46-208ENST00000367042 FOXD4L3Q6VB84 417 aaPredicted RBP10.13□□□□□ -0.79
CD46-208ENST00000367042 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 CHMP4BQ9H444 224 aaKnown RBP10.13□□□□□ -0.79
CD46-208ENST00000367042 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 GCC1Q96CN9 775 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 CDC45O75419 566 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 RAB3GAP1Q15042 981 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 SBNO2Q9Y2G9 1366 aa10.13□□□□□ -0.79
CD46-208ENST00000367042 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
CD46-208ENST00000367042 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
CD46-208ENST00000367042 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
CD46-208ENST00000367042 ABCC11Q96J66 1382 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 YEATS2Q9ULM3 1422 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 IQSEC2Q5JU85 1478 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 SNX21Q969T3 373 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 PHACTR3Q96KR7 559 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms