RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 PRAM1Q96QH2 718 aa10.03□□□□□ -0.8
ATF3-203ENST00000366981 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
ATF3-203ENST00000366981 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
ATF3-203ENST00000366981 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
ATF3-203ENST00000366981 EID1Q9Y6B2 187 aa10.02□□□□□ -0.81
ATF3-203ENST00000366981 ATP7BP35670 1465 aa10.02□□□□□ -0.81
ATF3-203ENST00000366981 KIF20BQ96Q89 1820 aa10.02□□□□□ -0.81
ATF3-203ENST00000366981 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
ATF3-203ENST00000366981 NWD1Q149M9 1564 aa10.01□□□□□ -0.81
ATF3-203ENST00000366981 POLA2Q14181 598 aa10.01□□□□□ -0.81
ATF3-203ENST00000366981 ITSN1Q15811 1721 aa10□□□□□ -0.81
ATF3-203ENST00000366981 NLRP13Q86W25 1043 aa10□□□□□ -0.81
ATF3-203ENST00000366981 PNISRQ8TF01 805 aaKnown RBP10□□□□□ -0.81
ATF3-203ENST00000366981 MRS2Q9HD23 443 aa10□□□□□ -0.81
ATF3-203ENST00000366981 STK26Q9P289 416 aa10□□□□□ -0.81
ATF3-203ENST00000366981 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
ATF3-203ENST00000366981 CDC42BPGQ6DT37 1551 aa10□□□□□ -0.81
ATF3-203ENST00000366981 NSD2O96028 1365 aa10□□□□□ -0.81
ATF3-203ENST00000366981 CPSF1Q10570 1443 aaKnown RBP9.99□□□□□ -0.81
ATF3-203ENST00000366981 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
ATF3-203ENST00000366981 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
ATF3-203ENST00000366981 NRKQ7Z2Y5 1582 aa9.99□□□□□ -0.81
ATF3-203ENST00000366981 FMN2Q9NZ56 1722 aa9.99□□□□□ -0.81
ATF3-203ENST00000366981 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
ATF3-203ENST00000366981 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
ATF3-203ENST00000366981 CDK19Q9BWU1 502 aa9.98□□□□□ -0.81
ATF3-203ENST00000366981 POGKQ9P215 609 aa9.98□□□□□ -0.81
ATF3-203ENST00000366981 A0A1W2PP64 1363 aa9.98□□□□□ -0.81
ATF3-203ENST00000366981 SHPRHQ149N8 1683 aa9.97□□□□□ -0.81
ATF3-203ENST00000366981 RGPD8O14715 1765 aaPredicted RBP9.97□□□□□ -0.81
ATF3-203ENST00000366981 WASLO00401 505 aaPredicted RBP9.97□□□□□ -0.81
ATF3-203ENST00000366981 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
ATF3-203ENST00000366981 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
ATF3-203ENST00000366981 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
ATF3-203ENST00000366981 NALCNQ8IZF0 1738 aa9.96□□□□□ -0.81
ATF3-203ENST00000366981 PPP2R1AP30153 589 aa9.96□□□□□ -0.82
ATF3-203ENST00000366981 ANKLE2Q86XL3 938 aa9.96□□□□□ -0.82
ATF3-203ENST00000366981 NPHP4O75161 1426 aaPredicted RBP9.96□□□□□ -0.82
ATF3-203ENST00000366981 BLMP54132 1417 aaPredicted RBP9.96□□□□□ -0.82
ATF3-203ENST00000366981 LRRC7Q96NW7 1537 aa9.96□□□□□ -0.82
ATF3-203ENST00000366981 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
ATF3-203ENST00000366981 CC2D1BQ5T0F9 858 aaKnown RBP9.95□□□□□ -0.82
ATF3-203ENST00000366981 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
ATF3-203ENST00000366981 AMOTL2Q9Y2J4 779 aa9.95□□□□□ -0.82
ATF3-203ENST00000366981 POLR3AO14802 1390 aaPredicted RBP9.94□□□□□ -0.82
ATF3-203ENST00000366981 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
ATF3-203ENST00000366981 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATF3-203ENST00000366981 SLC26A8Q96RN1 970 aa9.94□□□□□ -0.82
ATF3-203ENST00000366981 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 CGNL1Q0VF96 1302 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
ATF3-203ENST00000366981 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 TMC1Q8TDI8 760 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 STRCP1A6NGW2 1772 aa9.93□□□□□ -0.82
ATF3-203ENST00000366981 NKTRP30414 1462 aaKnown RBP9.92□□□□□ -0.82
ATF3-203ENST00000366981 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
ATF3-203ENST00000366981 PPIP5K1Q6PFW1 1433 aa9.92□□□□□ -0.82
ATF3-203ENST00000366981 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
ATF3-203ENST00000366981 MAP2P11137 1827 aaKnown RBP9.92□□□□□ -0.82
ATF3-203ENST00000366981 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
ATF3-203ENST00000366981 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
ATF3-203ENST00000366981 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
ATF3-203ENST00000366981 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
ATF3-203ENST00000366981 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
ATF3-203ENST00000366981 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
ATF3-203ENST00000366981 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
ATF3-203ENST00000366981 COL3A1P02461 1466 aaPredicted RBP9.91□□□□□ -0.82
ATF3-203ENST00000366981 MARF1Q9Y4F3 1742 aaKnown RBP9.9□□□□□ -0.82
ATF3-203ENST00000366981 FYB1O15117 783 aa9.9□□□□□ -0.82
ATF3-203ENST00000366981 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
ATF3-203ENST00000366981 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
ATF3-203ENST00000366981 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.83
ATF3-203ENST00000366981 KCNA6P17658 529 aa9.89□□□□□ -0.83
ATF3-203ENST00000366981 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
ATF3-203ENST00000366981 HDGFL2Q7Z4V5 671 aaPredicted RBP9.89□□□□□ -0.83
ATF3-203ENST00000366981 XIRP1Q702N8 1843 aaKnown RBP9.89□□□□□ -0.83
ATF3-203ENST00000366981 PNPLA6Q8IY17 1366 aa9.88□□□□□ -0.83
ATF3-203ENST00000366981 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
ATF3-203ENST00000366981 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
ATF3-203ENST00000366981 NCOA3Q9Y6Q9 1424 aa9.88□□□□□ -0.83
ATF3-203ENST00000366981 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATF3-203ENST00000366981 USP6P35125 1406 aa9.87□□□□□ -0.83
ATF3-203ENST00000366981 AATKQ6ZMQ8 1374 aa9.87□□□□□ -0.83
ATF3-203ENST00000366981 OVOS2A0A0J9YW53 1432 aa9.86□□□□□ -0.83
ATF3-203ENST00000366981 OVOS2Q6IE36 1432 aa9.86□□□□□ -0.83
ATF3-203ENST00000366981 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
ATF3-203ENST00000366981 PIK3C2AO00443 1686 aa9.86□□□□□ -0.83
ATF3-203ENST00000366981 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
ATF3-203ENST00000366981 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
ATF3-203ENST00000366981 CNGB1Q14028 1251 aaPredicted RBP9.84□□□□□ -0.83
ATF3-203ENST00000366981 ADAMTS8Q9UP79 889 aa9.84□□□□□ -0.83
ATF3-203ENST00000366981 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
ATF3-203ENST00000366981 ACEP12821 1306 aa9.83□□□□□ -0.84
ATF3-203ENST00000366981 ZNF521Q96K83 1311 aa9.83□□□□□ -0.84
ATF3-203ENST00000366981 DCCP43146 1447 aa9.83□□□□□ -0.84
ATF3-203ENST00000366981 TRPM3Q9HCF6 1732 aaPredicted RBP9.83□□□□□ -0.84
ATF3-203ENST00000366981 C14orf37Q86TY3 774 aa9.83□□□□□ -0.84
ATF3-203ENST00000366981 CDK12Q9NYV4 1490 aaPredicted RBP9.83□□□□□ -0.84
ATF3-203ENST00000366981 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms