RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
H3F3A-202ENST00000366814 INSRP06213 1382 aa14.57□□□□□ -0.08
H3F3A-202ENST00000366814 LRRC59Q96AG4 307 aaKnown RBP14.57□□□□□ -0.08
H3F3A-202ENST00000366814 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
H3F3A-202ENST00000366814 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
H3F3A-202ENST00000366814 NHSL1Q5SYE7 1610 aa14.55□□□□□ -0.08
H3F3A-202ENST00000366814 CDC42BPGQ6DT37 1551 aa14.55□□□□□ -0.08
H3F3A-202ENST00000366814 EVC2Q86UK5 1308 aa14.55□□□□□ -0.08
H3F3A-202ENST00000366814 SPATA31A6Q5VVP1 1343 aa14.54□□□□□ -0.08
H3F3A-202ENST00000366814 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
H3F3A-202ENST00000366814 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
H3F3A-202ENST00000366814 MEX3CQ5U5Q3 659 aaKnown RBP14.53□□□□□ -0.08
H3F3A-202ENST00000366814 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
H3F3A-202ENST00000366814 SMG6Q86US8 1419 aaKnown RBP14.53□□□□□ -0.08
H3F3A-202ENST00000366814 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
H3F3A-202ENST00000366814 SHPRHQ149N8 1683 aa14.52□□□□□ -0.09
H3F3A-202ENST00000366814 FOXO3O43524 673 aa14.51□□□□□ -0.09
H3F3A-202ENST00000366814 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
H3F3A-202ENST00000366814 ERICH6BQ5W0A0 696 aa14.51□□□□□ -0.09
H3F3A-202ENST00000366814 NUDCQ9Y266 331 aa14.51□□□□□ -0.09
H3F3A-202ENST00000366814 FMN2Q9NZ56 1722 aa14.51□□□□□ -0.09
H3F3A-202ENST00000366814 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
H3F3A-202ENST00000366814 RGS17Q9UGC6 210 aaPredicted RBP14.5□□□□□ -0.09
H3F3A-202ENST00000366814 NPHP3Q7Z494 1330 aa14.5□□□□□ -0.09
H3F3A-202ENST00000366814 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
H3F3A-202ENST00000366814 RGPD8O14715 1765 aaPredicted RBP14.5□□□□□ -0.09
H3F3A-202ENST00000366814 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
H3F3A-202ENST00000366814 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
H3F3A-202ENST00000366814 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
H3F3A-202ENST00000366814 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
H3F3A-202ENST00000366814 NINLQ9Y2I6 1382 aa14.48□□□□□ -0.09
H3F3A-202ENST00000366814 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
H3F3A-202ENST00000366814 SOCS7O14512 581 aa14.48□□□□□ -0.09
H3F3A-202ENST00000366814 PDE3BQ13370 1112 aa14.48□□□□□ -0.09
H3F3A-202ENST00000366814 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
H3F3A-202ENST00000366814 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
H3F3A-202ENST00000366814 PNPLA6Q8IY17 1366 aa14.47□□□□□ -0.09
H3F3A-202ENST00000366814 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
H3F3A-202ENST00000366814 PHF8Q9UPP1 1060 aa14.47□□□□□ -0.09
H3F3A-202ENST00000366814 LRP6O75581 1613 aa14.46□□□□□ -0.09
H3F3A-202ENST00000366814 NSD3Q9BZ95 1437 aa14.46□□□□□ -0.09
H3F3A-202ENST00000366814 ATAD2Q6PL18 1390 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
H3F3A-202ENST00000366814 POTEAQ6S8J7 498 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 KRT28Q7Z3Y7 464 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 CGNL1Q0VF96 1302 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
H3F3A-202ENST00000366814 PMFBP1Q8TBY8 1022 aa14.44□□□□□ -0.1
H3F3A-202ENST00000366814 KIF1AQ12756 1690 aa14.44□□□□□ -0.1
H3F3A-202ENST00000366814 NSD2O96028 1365 aa14.44□□□□□ -0.1
H3F3A-202ENST00000366814 SRPK2P78362 688 aaKnown RBP14.44□□□□□ -0.1
H3F3A-202ENST00000366814 PSME1Q06323 249 aa14.44□□□□□ -0.1
H3F3A-202ENST00000366814 SLC12A5Q9H2X9 1139 aa14.44□□□□□ -0.1
H3F3A-202ENST00000366814 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
H3F3A-202ENST00000366814 ADAMTS2O95450 1211 aa14.43□□□□□ -0.1
H3F3A-202ENST00000366814 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
H3F3A-202ENST00000366814 PXDNQ92626 1479 aa14.42□□□□□ -0.1
H3F3A-202ENST00000366814 MORC1Q86VD1 984 aa14.42□□□□□ -0.1
H3F3A-202ENST00000366814 C8orf37Q96NL8 207 aa14.42□□□□□ -0.1
H3F3A-202ENST00000366814 ANKARQ7Z5J8 1434 aa14.42□□□□□ -0.1
H3F3A-202ENST00000366814 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
H3F3A-202ENST00000366814 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
H3F3A-202ENST00000366814 LMOD2Q6P5Q4 547 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 NGLY1Q96IV0 654 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
H3F3A-202ENST00000366814 RTN4Q9NQC3 1192 aaKnown RBP14.4□□□□□ -0.1
H3F3A-202ENST00000366814 TERF2IPQ9NYB0 399 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 AFF2P51816 1311 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 SPATA31A3Q5VYP0 1347 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 PRR36Q9H6K5 1346 aa14.4□□□□□ -0.1
H3F3A-202ENST00000366814 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
H3F3A-202ENST00000366814 NGDNQ8NEJ9 315 aaKnown RBP14.39□□□□□ -0.11
H3F3A-202ENST00000366814 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
H3F3A-202ENST00000366814 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
H3F3A-202ENST00000366814 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
H3F3A-202ENST00000366814 SALL2Q9Y467 1007 aaPredicted RBP14.38□□□□□ -0.11
H3F3A-202ENST00000366814 COL22A1Q8NFW1 1626 aaPredicted RBP14.37□□□□□ -0.11
H3F3A-202ENST00000366814 SENP3-EIF4A1A0A087X0R7 540 aa14.37□□□□□ -0.11
H3F3A-202ENST00000366814 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
H3F3A-202ENST00000366814 HDGFL2Q7Z4V5 671 aaPredicted RBP14.37□□□□□ -0.11
H3F3A-202ENST00000366814 MKRN4PQ13434 485 aaPredicted RBP14.36□□□□□ -0.11
H3F3A-202ENST00000366814 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
H3F3A-202ENST00000366814 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 A0A1W2PP64 1363 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 SBNO1A3KN83 1393 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 RNF123Q5XPI4 1314 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
H3F3A-202ENST00000366814 RXRBP28702 533 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
H3F3A-202ENST00000366814 TNS3Q68CZ2 1445 aa14.35□□□□□ -0.11
H3F3A-202ENST00000366814 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
H3F3A-202ENST00000366814 CABLES1Q8TDN4 633 aa14.33□□□□□ -0.11
H3F3A-202ENST00000366814 USP21Q9UK80 565 aa14.33□□□□□ -0.11
H3F3A-202ENST00000366814 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
H3F3A-202ENST00000366814 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
H3F3A-202ENST00000366814 ARHGEF10O15013 1369 aa14.33□□□□□ -0.12
H3F3A-202ENST00000366814 ATP7BP35670 1465 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms