RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 CCDC61Q9Y6R9 512 aa17.64■□□□□ 0.41
PARP1-203ENST00000366794 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
PARP1-203ENST00000366794 KDM5CP41229 1560 aa17.63■□□□□ 0.41
PARP1-203ENST00000366794 F6X3S4 739 aa17.63■□□□□ 0.41
PARP1-203ENST00000366794 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
PARP1-203ENST00000366794 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
PARP1-203ENST00000366794 PSME1Q06323 249 aa17.62■□□□□ 0.41
PARP1-203ENST00000366794 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.62■□□□□ 0.419e-7■□□□□ 8
PARP1-203ENST00000366794 NAP1L5Q96NT1 182 aaPredicted RBP17.61■□□□□ 0.41
PARP1-203ENST00000366794 RNF123Q5XPI4 1314 aa17.61■□□□□ 0.41
PARP1-203ENST00000366794 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
PARP1-203ENST00000366794 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
PARP1-203ENST00000366794 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
PARP1-203ENST00000366794 C8orf34Q49A92 452 aa17.6■□□□□ 0.41
PARP1-203ENST00000366794 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
PARP1-203ENST00000366794 CDC42BPAQ5VT25 1732 aa17.59■□□□□ 0.41
PARP1-203ENST00000366794 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
PARP1-203ENST00000366794 TEFQ10587 303 aa17.59■□□□□ 0.41
PARP1-203ENST00000366794 FCHSD2O94868 740 aa17.58■□□□□ 0.41
PARP1-203ENST00000366794 USP35Q9P2H5 1018 aa17.58■□□□□ 0.41
PARP1-203ENST00000366794 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
PARP1-203ENST00000366794 ESCO1Q5FWF5 840 aa17.58■□□□□ 0.4
PARP1-203ENST00000366794 CHD1O14646 1710 aa17.58■□□□□ 0.4
PARP1-203ENST00000366794 WASLO00401 505 aaPredicted RBP17.57■□□□□ 0.4
PARP1-203ENST00000366794 HMMRO75330 724 aa17.57■□□□□ 0.4
PARP1-203ENST00000366794 A0A1W2PP64 1363 aa17.57■□□□□ 0.4
PARP1-203ENST00000366794 POLKQ9UBT6 870 aa17.57■□□□□ 0.4
PARP1-203ENST00000366794 MAP4K4O95819 1239 aaPredicted RBP17.56■□□□□ 0.4
PARP1-203ENST00000366794 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
PARP1-203ENST00000366794 ATP10AO60312 1499 aa17.56■□□□□ 0.4
PARP1-203ENST00000366794 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 ANO2Q9NQ90 1003 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 FGD1P98174 961 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 ZNF518AQ6AHZ1 1483 aa17.55■□□□□ 0.4
PARP1-203ENST00000366794 PTMAP06454 111 aaKnown RBP17.54■□□□□ 0.4
PARP1-203ENST00000366794 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
PARP1-203ENST00000366794 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
PARP1-203ENST00000366794 FOXO3O43524 673 aa17.54■□□□□ 0.4
PARP1-203ENST00000366794 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
PARP1-203ENST00000366794 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
PARP1-203ENST00000366794 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
PARP1-203ENST00000366794 NPATQ14207 1427 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 ANXA1P04083 346 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 MAST1Q9Y2H9 1570 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 ARID3AQ99856 593 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 AMOTL2Q9Y2J4 779 aa17.52■□□□□ 0.4
PARP1-203ENST00000366794 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
PARP1-203ENST00000366794 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
PARP1-203ENST00000366794 DDX49Q9Y6V7 483 aaKnown RBP17.51■□□□□ 0.39
PARP1-203ENST00000366794 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
PARP1-203ENST00000366794 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
PARP1-203ENST00000366794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
PARP1-203ENST00000366794 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
PARP1-203ENST00000366794 ACEP12821 1306 aa17.49■□□□□ 0.39
PARP1-203ENST00000366794 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
PARP1-203ENST00000366794 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
PARP1-203ENST00000366794 MCCP23508 829 aa17.49■□□□□ 0.39
PARP1-203ENST00000366794 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
PARP1-203ENST00000366794 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
PARP1-203ENST00000366794 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
PARP1-203ENST00000366794 TRIM35Q9UPQ4 493 aa17.48■□□□□ 0.39
PARP1-203ENST00000366794 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
PARP1-203ENST00000366794 KDM5DQ9BY66 1539 aa17.48■□□□□ 0.39
PARP1-203ENST00000366794 PTPRTO14522 1441 aa17.47■□□□□ 0.39
PARP1-203ENST00000366794 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
PARP1-203ENST00000366794 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
PARP1-203ENST00000366794 L1TD1Q5T7N2 865 aaKnown RBP17.47■□□□□ 0.39
PARP1-203ENST00000366794 HDGFL1Q5TGJ6 251 aa17.47■□□□□ 0.39
PARP1-203ENST00000366794 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
PARP1-203ENST00000366794 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
PARP1-203ENST00000366794 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
PARP1-203ENST00000366794 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.38
PARP1-203ENST00000366794 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
PARP1-203ENST00000366794 CDC45O75419 566 aa17.45■□□□□ 0.38
PARP1-203ENST00000366794 ST18O60284 1047 aa17.44■□□□□ 0.38
PARP1-203ENST00000366794 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
PARP1-203ENST00000366794 TRAK2O60296 914 aa17.44■□□□□ 0.38
PARP1-203ENST00000366794 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
PARP1-203ENST00000366794 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
PARP1-203ENST00000366794 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
PARP1-203ENST00000366794 LARP6Q9BRS8 491 aaKnown RBP17.44■□□□□ 0.38
PARP1-203ENST00000366794 NEK4P51957 841 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 MPNDQ8N594 471 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 MEIS3Q99687 375 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
PARP1-203ENST00000366794 SIL1Q9H173 461 aa17.42■□□□□ 0.38
PARP1-203ENST00000366794 DTNBO60941 627 aa17.42■□□□□ 0.38
PARP1-203ENST00000366794 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
PARP1-203ENST00000366794 ZCCHC11Q5TAX3 1644 aaKnown RBP17.42■□□□□ 0.38
PARP1-203ENST00000366794 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
PARP1-203ENST00000366794 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
PARP1-203ENST00000366794 EIF2AK4Q9P2K8 1649 aaKnown RBP17.41■□□□□ 0.38
PARP1-203ENST00000366794 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
PARP1-203ENST00000366794 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms