RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 F12P00748 615 aaPredicted RBP6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 CFHP08603 1231 aa6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 PTK7Q13308 1070 aa6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 SOWAHDA6NJG2 315 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L15C9J2P7 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L10C9JJH3 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L13C9JLJ4 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L11C9JVI0 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L21D6R901 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L18D6R9N7 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L22D6RA61 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L17D6RBQ6 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L19D6RCP7 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L20D6RJB6 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 PIK3CDO00329 1044 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 ACTN4O43707 911 aaKnown RBP6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L24Q0WX57 530 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 KMT5BQ4FZB7 885 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 SYMPKQ92797 1274 aaKnown RBP6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 GPKOWQ92917 476 aaPredicted RBP eCLIP6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 KCNK17Q96T54 332 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 SLAIN2Q9P270 581 aa6.29□□□□□ -1.4
RNVU1-3-201ENST00000364313 SNPHO15079 494 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 POTEJP0CG39 1038 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 SKIP12755 728 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 VAMP1P23763 118 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 NOM1Q5C9Z4 860 aaKnown RBP6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 RNF135Q8IUD6 432 aa6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
RNVU1-3-201ENST00000364313 CRTC2Q53ET0 693 aaPredicted RBP6.27□□□□□ -1.41
RNVU1-3-201ENST00000364313 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
RNVU1-3-201ENST00000364313 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
RNVU1-3-201ENST00000364313 CEP126Q9P2H0 1117 aa6.27□□□□□ -1.41
RNVU1-3-201ENST00000364313 SLC27A5Q9Y2P5 690 aa6.27□□□□□ -1.41
RNVU1-3-201ENST00000364313 ARHGAP33O14559 1287 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 ZNF16P17020 682 aaPredicted RBP6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 PTPRNQ16849 979 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 PDXDC2PQ6P474 469 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 LARP1Q6PKG0 1096 aaKnown RBP6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 ANKMY2Q8IV38 441 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 PRR14Q9BWN1 585 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 EGFL7Q9UHF1 273 aa6.26□□□□□ -1.41
RNVU1-3-201ENST00000364313 BRICD5Q6PL45 260 aa6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 MAMSTRQ6ZN01 415 aa6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 SAMD7Q7Z3H4 446 aa6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 ARMC2Q8NEN0 867 aa6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 MRRFQ96E11 262 aaKnown RBP6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 USB1Q9BQ65 265 aaKnown RBP6.25□□□□□ -1.41
RNVU1-3-201ENST00000364313 BHMG1C9JSJ3 638 aaPredicted RBP6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 DKK1O94907 266 aa6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 RASA1P20936 1047 aa6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 ATP2B4P23634 1241 aa6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 NCOA4Q13772 614 aa6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 TAS1R3Q7RTX0 852 aa6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 SEPT9Q9UHD8 586 aaPredicted RBP6.24□□□□□ -1.41
RNVU1-3-201ENST00000364313 PTK2Q05397 1052 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 COL19A1Q14993 1142 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 SLFNL1Q499Z3 407 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 TRAF7Q6Q0C0 670 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 TRIM50Q86XT4 487 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 LARGE2Q8N3Y3 721 aa6.23□□□□□ -1.41
RNVU1-3-201ENST00000364313 JUNDP17535 347 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 PBX2P40425 430 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 ATP1A2P50993 1020 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 MARSP56192 900 aaKnown RBP6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 SIX5Q8N196 739 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 PLPP7Q8NBV4 271 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 THAP11Q96EK4 314 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 EVA1BQ9NVM1 165 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 VPS9D1Q9Y2B5 631 aa6.22□□□□□ -1.41
RNVU1-3-201ENST00000364313 SERPINB4P48594 390 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 PSEN2P49810 448 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 EML3Q32P44 896 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 DEPDC4Q8N2C3 294 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 OCSTAMPQ9BR26 566 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 BCL2L13Q9BXK5 485 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 NBPF3Q9H094 633 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 SCUBE2Q9NQ36 999 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 MYT1LQ9UL68 1186 aa6.21□□□□□ -1.42
RNVU1-3-201ENST00000364313 ZBTB7BO15156 539 aaPredicted RBP6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 HMGB1P09429 215 aaKnown RBP6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 DPYDQ12882 1025 aa6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 MSS51Q4VC12 460 aa6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 ZNF326Q5BKZ1 582 aaKnown RBP6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 BLOC1S3Q6QNY0 202 aa6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 RNF19BQ6ZMZ0 732 aa6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 OGFOD1Q8N543 542 aa6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 ZFRQ96KR1 1074 aaKnown RBP6.2□□□□□ -1.42
RNVU1-3-201ENST00000364313 ANKRD33BA6NCL7 494 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 TK2O00142 265 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 FMNL1O95466 1100 aaPredicted RBP6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 TCF3P15923 654 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms