RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
VAMP1-201ENST00000361716 CD2BP2O95400 341 aaKnown RBP15.71■□□□□ 0.11
VAMP1-201ENST00000361716 PDE4CQ08493 712 aa15.71■□□□□ 0.1
VAMP1-201ENST00000361716 POLR1AO95602 1720 aaPredicted RBP15.71■□□□□ 0.1
VAMP1-201ENST00000361716 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
VAMP1-201ENST00000361716 FBLN1P23142 703 aa15.69■□□□□ 0.1
VAMP1-201ENST00000361716 RBSNQ9H1K0 784 aa15.69■□□□□ 0.1
VAMP1-201ENST00000361716 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
VAMP1-201ENST00000361716 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
VAMP1-201ENST00000361716 ZNF830Q96NB3 372 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-201ENST00000361716 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
VAMP1-201ENST00000361716 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
VAMP1-201ENST00000361716 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
VAMP1-201ENST00000361716 COL17A1Q9UMD9 1497 aaPredicted RBP15.68■□□□□ 0.1
VAMP1-201ENST00000361716 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
VAMP1-201ENST00000361716 BAG4O95429 457 aaKnown RBP15.68■□□□□ 0.1
VAMP1-201ENST00000361716 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
VAMP1-201ENST00000361716 SYCE3A1L190 88 aa15.68■□□□□ 0.1
VAMP1-201ENST00000361716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
VAMP1-201ENST00000361716 SOX12O15370 315 aa15.67■□□□□ 0.1
VAMP1-201ENST00000361716 TSPOAP1O95153 1857 aa15.67■□□□□ 0.1
VAMP1-201ENST00000361716 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
VAMP1-201ENST00000361716 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
VAMP1-201ENST00000361716 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
VAMP1-201ENST00000361716 ZSCAN23Q3MJ62 389 aa15.66■□□□□ 0.1
VAMP1-201ENST00000361716 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
VAMP1-201ENST00000361716 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
VAMP1-201ENST00000361716 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
VAMP1-201ENST00000361716 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
VAMP1-201ENST00000361716 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 VGLL3A8MV65 326 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 HMOX1P09601 288 aa15.65■□□□□ 0.1
VAMP1-201ENST00000361716 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-201ENST00000361716 PTMSP20962 102 aa15.64■□□□□ 0.09
VAMP1-201ENST00000361716 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
VAMP1-201ENST00000361716 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
VAMP1-201ENST00000361716 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
VAMP1-201ENST00000361716 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
VAMP1-201ENST00000361716 SASS6Q6UVJ0 657 aa15.64■□□□□ 0.09
VAMP1-201ENST00000361716 DYNC1I1O14576 645 aa15.63■□□□□ 0.09
VAMP1-201ENST00000361716 TRIM27P14373 513 aa15.63■□□□□ 0.09
VAMP1-201ENST00000361716 PKP1Q13835 747 aa15.63■□□□□ 0.09
VAMP1-201ENST00000361716 PPP4R3BQ5MIZ7 849 aa15.63■□□□□ 0.09
VAMP1-201ENST00000361716 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
VAMP1-201ENST00000361716 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
VAMP1-201ENST00000361716 SMC5Q8IY18 1101 aa15.62■□□□□ 0.09
VAMP1-201ENST00000361716 ZKSCAN5Q9Y2L8 839 aa15.62■□□□□ 0.09
VAMP1-201ENST00000361716 NSD3Q9BZ95 1437 aa15.62■□□□□ 0.09
VAMP1-201ENST00000361716 CDK11BP21127 795 aaKnown RBP15.62■□□□□ 0.09
VAMP1-201ENST00000361716 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
VAMP1-201ENST00000361716 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
VAMP1-201ENST00000361716 INO80Q9ULG1 1556 aaPredicted RBP15.61■□□□□ 0.09
VAMP1-201ENST00000361716 MTERF4Q7Z6M4 381 aaKnown RBP15.61■□□□□ 0.09
VAMP1-201ENST00000361716 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
VAMP1-201ENST00000361716 ZNF771Q7L3S4 317 aaPredicted RBP15.61■□□□□ 0.09
VAMP1-201ENST00000361716 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
VAMP1-201ENST00000361716 DEPDC5O75140 1603 aa15.61■□□□□ 0.09
VAMP1-201ENST00000361716 KANK1Q14678 1352 aa15.61■□□□□ 0.09
VAMP1-201ENST00000361716 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
VAMP1-201ENST00000361716 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
VAMP1-201ENST00000361716 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
VAMP1-201ENST00000361716 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
VAMP1-201ENST00000361716 DDX19BQ9UMR2 479 aa15.6■□□□□ 0.09
VAMP1-201ENST00000361716 CCDC39Q9UFE4 941 aa15.6■□□□□ 0.09
VAMP1-201ENST00000361716 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
VAMP1-201ENST00000361716 CGNQ9P2M7 1197 aaKnown RBP15.59■□□□□ 0.09
VAMP1-201ENST00000361716 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.09
VAMP1-201ENST00000361716 IPO8O15397 1037 aaKnown RBP15.57■□□□□ 0.08
VAMP1-201ENST00000361716 RTEL1-TNFRSF6BF6WH68 1400 aa15.56■□□□□ 0.08
VAMP1-201ENST00000361716 DMTNQ08495 405 aa15.56■□□□□ 0.08
VAMP1-201ENST00000361716 FBXO31Q5XUX0 539 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-201ENST00000361716 TBC1D9Q6ZT07 1266 aa15.56■□□□□ 0.08
VAMP1-201ENST00000361716 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
VAMP1-201ENST00000361716 SNX21Q969T3 373 aa15.56■□□□□ 0.08
VAMP1-201ENST00000361716 GPRASP1Q5JY77 1395 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
VAMP1-201ENST00000361716 TTC12Q9H892 705 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-201ENST00000361716 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
VAMP1-201ENST00000361716 YEATS2Q9ULM3 1422 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 KIF16BQ96L93 1317 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 ZBTB22O15209 634 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 ZNF500O60304 480 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-201ENST00000361716 GDPD2Q9HCC8 539 aa15.55■□□□□ 0.08
VAMP1-201ENST00000361716 NUTM2FA1L443 756 aa15.54■□□□□ 0.08
VAMP1-201ENST00000361716 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
VAMP1-201ENST00000361716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
VAMP1-201ENST00000361716 TMPOP42166 694 aaKnown RBP15.54■□□□□ 0.08
VAMP1-201ENST00000361716 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
VAMP1-201ENST00000361716 NINLQ9Y2I6 1382 aa15.53■□□□□ 0.08
VAMP1-201ENST00000361716 VWDEQ8N2E2 1590 aa15.53■□□□□ 0.08
VAMP1-201ENST00000361716 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
VAMP1-201ENST00000361716 NUCB2P80303 420 aa15.53■□□□□ 0.08
VAMP1-201ENST00000361716 ATP10AO60312 1499 aa15.53■□□□□ 0.08
VAMP1-201ENST00000361716 NSFL1CQ9UNZ2 370 aaKnown RBP15.53■□□□□ 0.08
VAMP1-201ENST00000361716 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms