RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 PRKAR2BP31323 418 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 COG3Q96JB2 828 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 AXIN2Q9Y2T1 843 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 BCL2L13Q9BXK5 485 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 DIAPH1O60610 1272 aaKnown RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 IL13P35225 146 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 EIF4A2Q14240 407 aaKnown RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 LRRC59Q96AG4 307 aaKnown RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 POLR3AO14802 1390 aaPredicted RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 KRT24Q2M2I5 525 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 ABTB2Q8N961 1025 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 NUDCQ9Y266 331 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 SETBP1Q9Y6X0 1596 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 ELL2O00472 640 aaPredicted RBP3.81□□□□□ -1.8
LTN1-201ENST00000361371 BCAR3O75815 825 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 DUSP27Q5VZP5 1158 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 PLEKHF1Q96S99 279 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 C19orf44Q9H6X5 657 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 SSH2Q76I76 1423 aa3.81□□□□□ -1.8
LTN1-201ENST00000361371 WWC1Q8IX03 1113 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 SLC24A1O60721 1099 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 SULT6B1Q6IMI4 303 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 ZNF692Q9BU19 519 aaPredicted RBP3.8□□□□□ -1.8
LTN1-201ENST00000361371 IQGAP1P46940 1657 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 EYA1Q99502 592 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 TRIM35Q9UPQ4 493 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 CEP170BQ9Y4F5 1589 aaPredicted RBP3.8□□□□□ -1.8
LTN1-201ENST00000361371 USP6P35125 1406 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 PSME1Q06323 249 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 B4GALNT3Q6L9W6 998 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 KRT28Q7Z3Y7 464 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 EXOC6Q8TAG9 804 aa3.8□□□□□ -1.8
LTN1-201ENST00000361371 SLFN5Q08AF3 891 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 NBPF6Q5VWK0 638 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 BRINP3Q76B58 766 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 NBPF4Q96M43 638 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 PHF23Q9BUL5 403 aaPredicted RBP3.79□□□□□ -1.8
LTN1-201ENST00000361371 MIS18AQ9NYP9 233 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 ZC3H13Q5T200 1668 aaKnown RBP3.79□□□□□ -1.8
LTN1-201ENST00000361371 LMTK3Q96Q04 1460 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 GCP02774 474 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 TMPOP42166 694 aaKnown RBP3.79□□□□□ -1.8
LTN1-201ENST00000361371 RSPH6AQ9H0K4 717 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 PNPLA6Q8IY17 1366 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 PIK3R4Q99570 1358 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 GOLGA2Q08379 1002 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 CFAP53Q96M91 514 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 PPLO60437 1756 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 PTCH1Q13635 1447 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 ADAMTSL3P82987 1691 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 RIMS1Q86UR5 1692 aaKnown RBP3.79□□□□□ -1.8
LTN1-201ENST00000361371 RIPK4P57078 832 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 RUNDC1Q96C34 613 aa3.79□□□□□ -1.8
LTN1-201ENST00000361371 EDC4Q6P2E9 1401 aaKnown RBP3.78□□□□□ -1.8
LTN1-201ENST00000361371 MCM10Q7L590 875 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 C3P01024 1663 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 HOXC9P31274 260 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 EXOSC9Q06265 439 aaKnown RBP3.78□□□□□ -1.8
LTN1-201ENST00000361371 C1orf167Q5SNV9 1468 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 ADGRL3Q9HAR2 1447 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 MTHFSDQ2M296 383 aaKnown RBP3.78□□□□□ -1.8
LTN1-201ENST00000361371 CLUAP1Q96AJ1 413 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 RCAN3Q9UKA8 241 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 LAS1LQ9Y4W2 734 aaKnown RBP3.78□□□□□ -1.8
LTN1-201ENST00000361371 AMPHP49418 695 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 ATF3P18847 181 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 TRMT2AQ8IZ69 625 aaKnown RBP3.78□□□□□ -1.8
LTN1-201ENST00000361371 SLAIN2Q9P270 581 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 UBR1Q8IWV7 1749 aa3.78□□□□□ -1.8
LTN1-201ENST00000361371 BLMP54132 1417 aaPredicted RBP3.78□□□□□ -1.81
LTN1-201ENST00000361371 IFT172Q9UG01 1749 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 OVOS2A0A0J9YW53 1432 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 OVOS2Q6IE36 1432 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.77□□□□□ -1.81
LTN1-201ENST00000361371 RLBP1P12271 317 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 SMG6Q86US8 1419 aaKnown RBP3.77□□□□□ -1.81
LTN1-201ENST00000361371 NINLQ9Y2I6 1382 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 ARHGEF25Q86VW2 580 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 MYO3AQ8NEV4 1616 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 MST1RQ04912 1400 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 COL3A1P02461 1466 aaPredicted RBP3.77□□□□□ -1.81
LTN1-201ENST00000361371 NSD2O96028 1365 aa3.77□□□□□ -1.81
LTN1-201ENST00000361371 FCHSD2O94868 740 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 LGR6Q9HBX8 967 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 USP31Q70CQ4 1352 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 MYOM1P52179 1685 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 RNF123Q5XPI4 1314 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 KCNQ3O43525 872 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 C8orf58Q8NAV2 365 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 FRAT1Q92837 279 aaPredicted RBP3.76□□□□□ -1.81
LTN1-201ENST00000361371 INSRP06213 1382 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 RRP1P56182 461 aaKnown RBP3.76□□□□□ -1.81
LTN1-201ENST00000361371 PANK1Q8TE04 598 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 CRBNQ96SW2 442 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 MAPK8IP3Q9UPT6 1336 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 CADPS2Q86UW7 1296 aa3.76□□□□□ -1.81
LTN1-201ENST00000361371 AATKQ6ZMQ8 1374 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms