RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 CFAP74Q9C0B2 1584 aa8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 DNMT1P26358 1616 aaKnown RBP8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 RWDD1Q9H446 243 aaPredicted RBP8.86□□□□□ -0.99
LRRTM3-201ENST00000361320 MYL6BP14649 208 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 PPIP5K1Q6PFW1 1433 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 GCP02774 474 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 TMEM94Q12767 1356 aa8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 YTHDC2Q9H6S0 1430 aaKnown RBP8.85□□□□□ -0.99
LRRTM3-201ENST00000361320 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 FCHSD2O94868 740 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 TSR2Q969E8 191 aaKnown RBP8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 THUMPD2Q9BTF0 503 aaKnown RBP8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 MIS18AQ9NYP9 233 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 DISP3Q9P2K9 1392 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 DCTN1Q14203 1278 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 BTG4Q9NY30 223 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 ADGRL2O95490 1459 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 MCM10Q7L590 875 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
LRRTM3-201ENST00000361320 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 FYB1O15117 783 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 ADCY10Q96PN6 1610 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 SAMD9LQ8IVG5 1584 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 TRIM6-TRIM34B2RNG4 842 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 ABCC1P33527 1531 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 EXOSC9Q06265 439 aaKnown RBP8.83□□□□□ -1
LRRTM3-201ENST00000361320 DDB1Q16531 1140 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 GPATCH3Q96I76 525 aa8.83□□□□□ -1
LRRTM3-201ENST00000361320 PZPP20742 1482 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 TWISTNBQ3B726 338 aaPredicted RBP8.82□□□□□ -1
LRRTM3-201ENST00000361320 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 PNISRQ8TF01 805 aaKnown RBP8.82□□□□□ -1
LRRTM3-201ENST00000361320 PRAG1Q86YV5 1406 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 ARHGEF12Q9NZN5 1544 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 KIAA1211Q6ZU35 1233 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
LRRTM3-201ENST00000361320 STARD3NLO95772 234 aa8.82□□□□□ -1
LRRTM3-201ENST00000361320 SLC4A2P04920 1241 aa8.81□□□□□ -1
LRRTM3-201ENST00000361320 CDCA7LQ96GN5 454 aa8.81□□□□□ -1
LRRTM3-201ENST00000361320 IFNL2Q8IZJ0 200 aa8.81□□□□□ -1
LRRTM3-201ENST00000361320 NFE2L2Q16236 605 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
LRRTM3-201ENST00000361320 MAST1Q9Y2H9 1570 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 UGGT1Q9NYU2 1555 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 HECW2Q9P2P5 1572 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 ZCRB1Q8TBF4 217 aaKnown RBP8.8□□□□□ -1
LRRTM3-201ENST00000361320 TOMM22Q9NS69 142 aa8.8□□□□□ -1
LRRTM3-201ENST00000361320 TMPOP42166 694 aaKnown RBP8.8□□□□□ -1
LRRTM3-201ENST00000361320 KIF16BQ96L93 1317 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 ARHGEF5Q12774 1597 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -1
LRRTM3-201ENST00000361320 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 CCDC184Q52MB2 194 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
LRRTM3-201ENST00000361320 ZPR1O75312 459 aa8.79□□□□□ -1
LRRTM3-201ENST00000361320 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
LRRTM3-201ENST00000361320 USP21Q9UK80 565 aa8.78□□□□□ -1
LRRTM3-201ENST00000361320 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
LRRTM3-201ENST00000361320 NEUROD6Q96NK8 337 aa8.78□□□□□ -1
LRRTM3-201ENST00000361320 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
LRRTM3-201ENST00000361320 ANKRD45Q5TZF3 282 aa8.78□□□□□ -1
LRRTM3-201ENST00000361320 METP08581 1390 aa8.78□□□□□ -1
LRRTM3-201ENST00000361320 PHF14O94880 888 aa8.77□□□□□ -1
LRRTM3-201ENST00000361320 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1
LRRTM3-201ENST00000361320 IL2RBP14784 551 aa8.77□□□□□ -1
LRRTM3-201ENST00000361320 TESK2Q96S53 571 aa8.77□□□□□ -1
LRRTM3-201ENST00000361320 ANKRD36BQ8N2N9 1353 aa8.77□□□□□ -1
LRRTM3-201ENST00000361320 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 EFCAB6Q5THR3 1501 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 KDM5DQ9BY66 1539 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 TRPM2O94759 1503 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 TAF7Q15545 349 aaPredicted RBP8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 AK7Q96M32 723 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 DDX19BQ9UMR2 479 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 PREX2Q70Z35 1606 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 PLEKHH1Q9ULM0 1364 aa8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 CCDC85AQ96PX6 553 aaPredicted RBP8.77□□□□□ -1.01
LRRTM3-201ENST00000361320 MCCP23508 829 aa8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 BECN1Q14457 450 aa8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 ABCC11Q96J66 1382 aa8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 MAP3K19Q56UN5 1328 aa8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 IFIT2P09913 472 aaKnown RBP8.76□□□□□ -1.01
LRRTM3-201ENST00000361320 PANK1Q8TE04 598 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms