RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TSHZ2Q9NRE2 1034 aa5.9□□□□□ -1.46
SCN3A-202ENST00000360093 KIAA0556O60303 1618 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 TSR1Q2NL82 804 aaKnown RBP5.9□□□□□ -1.47
SCN3A-202ENST00000360093 PLCH2O75038 1416 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 ZNF518AQ6AHZ1 1483 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 GOLGA6L19H0YKK7 550 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 NUDT16Q96DE0 195 aaKnown RBP5.9□□□□□ -1.47
SCN3A-202ENST00000360093 ANO2Q9NQ90 1003 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 CDC45O75419 566 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 TBC1D2BQ9UPU7 963 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 SCAF11Q99590 1463 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 NUTM2GQ5VZR2 741 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CTDP1Q9Y5B0 961 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 DEKP35659 375 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SULT6B1Q6IMI4 303 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 RALYLQ86SE5 291 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPM1P09493 284 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CABP4P57796 275 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 NSD3Q9BZ95 1437 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 DMRT2Q9Y5R5 561 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPM3P06753 285 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SAFBQ15424 915 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPD52L1Q16890 204 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SRCIN1Q9C0H9 1055 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 GZF1Q9H116 711 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 XBP1P17861 261 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 AIMP1Q12904 312 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TOM1L2Q6ZVM7 507 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CHMP5Q9NZZ3 219 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 KDM5BQ9UGL1 1544 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 FANCIQ9NVI1 1328 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 ABCC11Q96J66 1382 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 HDGFL1Q5TGJ6 251 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 GNL3LQ9NVN8 582 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 TCEAL9Q9UHQ7 104 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 WDR7Q9Y4E6 1490 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 AMOTQ4VCS5 1084 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 DDX49Q9Y6V7 483 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SART3Q15020 963 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 DNAJC5BQ9UF47 199 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 ATP10BO94823 1461 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 BRMS1Q9HCU9 246 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NFXL1Q6ZNB6 911 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SMC3Q9UQE7 1217 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NUP160Q12769 1436 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 NEUROD6Q96NK8 337 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 BECN2A8MW95 431 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 EXOSC9Q06265 439 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 NFE2L2Q16236 605 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ZNF530Q6P9A1 599 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PRDM11Q9NQV5 511 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 WDR62O43379 1518 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 EIF4G3O43432 1585 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 GNAT3A8MTJ3 354 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 C22orf23Q9BZE7 217 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PDIA4P13667 645 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 CCDC158Q5M9N0 1113 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 MCTP1Q6DN14 999 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ZSCAN25Q6NSZ9 544 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 SLC4A2P04920 1241 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ASXL2Q76L83 1435 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 A2MP01023 1474 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PDCP20941 246 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 NOC3LQ8WTT2 800 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 ABCC10Q5T3U5 1492 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 SHANK2Q9UPX8 1470 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 BTBD11A6QL63 1104 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 WASHC4Q2M389 1173 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 SF3B2Q13435 895 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 FOXD4L1Q9NU39 408 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 STARD3NLO95772 234 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 ANKRD1Q15327 319 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 C14orf93Q9H972 538 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 IFT57Q9NWB7 429 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 LRRCC1Q9C099 1032 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 RBM42Q9BTD8 480 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 NUP153P49790 1475 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 IDI1Q13907 227 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 MVPQ14764 893 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 FSD1Q9BTV5 496 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 TCOF1Q13428 1488 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms