RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 TOPAZ1Q8N9V7 1692 aa33.83■■■■□ 3.01
YIF1A-201ENST00000359461 KIAA1210Q9ULL0 1709 aa33.82■■■■□ 3
YIF1A-201ENST00000359461 PHRF1Q9P1Y6 1649 aaKnown RBP33.8■■■■□ 3
YIF1A-201ENST00000359461 CCDC9Q9Y3X0 531 aaKnown RBP33.8■■■■□ 3
YIF1A-201ENST00000359461 THSD7AQ9UPZ6 1657 aa33.79■■■■□ 3
YIF1A-201ENST00000359461 KRT27Q7Z3Y8 459 aa33.78■■■■□ 3
YIF1A-201ENST00000359461 DEFB132Q7Z7B7 95 aa33.76■■■□□ 2.99
YIF1A-201ENST00000359461 BTG4Q9NY30 223 aa33.76■■■□□ 2.99
YIF1A-201ENST00000359461 RGPD1P0DJD0 1748 aa33.74■■■□□ 2.99
YIF1A-201ENST00000359461 NGDNQ8NEJ9 315 aaKnown RBP33.72■■■□□ 2.99
YIF1A-201ENST00000359461 SF3B2Q13435 895 aaKnown RBP33.71■■■□□ 2.99
YIF1A-201ENST00000359461 FAM98CQ17RN3 349 aaKnown RBP33.7■■■□□ 2.99
YIF1A-201ENST00000359461 LRP5O75197 1615 aa33.7■■■□□ 2.99
YIF1A-201ENST00000359461 SPATA31A5Q5VU36 1347 aa33.69■■■□□ 2.98
YIF1A-201ENST00000359461 SPATA31A7Q8IWB4 1347 aa33.69■■■□□ 2.98
YIF1A-201ENST00000359461 NUDT16Q96DE0 195 aaKnown RBP33.68■■■□□ 2.98
YIF1A-201ENST00000359461 TNS1Q9HBL0 1735 aaKnown RBP33.67■■■□□ 2.98
YIF1A-201ENST00000359461 POLR3AO14802 1390 aaPredicted RBP33.67■■■□□ 2.98
YIF1A-201ENST00000359461 A0A0G2JS52 829 aa33.64■■■□□ 2.98
YIF1A-201ENST00000359461 PAK3O75914 559 aaPredicted RBP33.64■■■□□ 2.98
YIF1A-201ENST00000359461 MYT1Q01538 1121 aa33.64■■■□□ 2.98
YIF1A-201ENST00000359461 PRDM11Q9NQV5 511 aa33.63■■■□□ 2.97
YIF1A-201ENST00000359461 NRKQ7Z2Y5 1582 aa33.63■■■□□ 2.97
YIF1A-201ENST00000359461 KIAA0232Q92628 1395 aa33.61■■■□□ 2.97
YIF1A-201ENST00000359461 CDK19Q9BWU1 502 aa33.6■■■□□ 2.97
YIF1A-201ENST00000359461 BAG6P46379 1132 aa33.58■■■□□ 2.97
YIF1A-201ENST00000359461 DISP2A7MBM2 1401 aa33.58■■■□□ 2.97
YIF1A-201ENST00000359461 LMO7Q8WWI1 1683 aa33.58■■■□□ 2.97
YIF1A-201ENST00000359461 SPATA31A1Q5TZJ5 1347 aa33.55■■■□□ 2.96
YIF1A-201ENST00000359461 CCDC61Q9Y6R9 512 aa33.55■■■□□ 2.96
YIF1A-201ENST00000359461 ACEP12821 1306 aa33.54■■■□□ 2.96
YIF1A-201ENST00000359461 PLEKHG3A1L390 1219 aa33.54■■■□□ 2.96
YIF1A-201ENST00000359461 QRICH2Q9H0J4 1663 aa33.53■■■□□ 2.96
YIF1A-201ENST00000359461 NBPF8Q3BBV2 869 aa33.52■■■□□ 2.96
YIF1A-201ENST00000359461 CHRNA2Q15822 529 aa33.51■■■□□ 2.95
YIF1A-201ENST00000359461 FAM182BQ5T319 152 aa33.5■■■□□ 2.95
YIF1A-201ENST00000359461 CAMTA1Q9Y6Y1 1673 aa33.49■■■□□ 2.95
YIF1A-201ENST00000359461 NBPF1Q3BBV0 1214 aa33.49■■■□□ 2.95
YIF1A-201ENST00000359461 USP19O94966 1318 aa33.49■■■□□ 2.95
YIF1A-201ENST00000359461 CPDO75976 1380 aa33.48■■■□□ 2.95
YIF1A-201ENST00000359461 SSH2Q76I76 1423 aa33.48■■■□□ 2.95
YIF1A-201ENST00000359461 ZC3H6P61129 1189 aaKnown RBP33.47■■■□□ 2.95
YIF1A-201ENST00000359461 NUTM2GQ5VZR2 741 aa33.47■■■□□ 2.95
YIF1A-201ENST00000359461 PPIP5K1Q6PFW1 1433 aa33.45■■■□□ 2.95
YIF1A-201ENST00000359461 EN1Q05925 392 aaPredicted RBP33.45■■■□□ 2.95
YIF1A-201ENST00000359461 STRN4Q9NRL3 753 aa33.44■■■□□ 2.94
YIF1A-201ENST00000359461 RREB1Q92766 1687 aa33.42■■■□□ 2.94
YIF1A-201ENST00000359461 PSDA5PKW4 1024 aaPredicted RBP33.42■■■□□ 2.94
YIF1A-201ENST00000359461 CENPJQ9HC77 1338 aaPredicted RBP33.42■■■□□ 2.94
YIF1A-201ENST00000359461 PARP4Q9UKK3 1724 aaKnown RBP33.42■■■□□ 2.94
YIF1A-201ENST00000359461 BARGINQ6ZT62 677 aa33.41■■■□□ 2.94
YIF1A-201ENST00000359461 BRD4O60885 1362 aaPredicted RBP33.41■■■□□ 2.94
YIF1A-201ENST00000359461 ABTB2Q8N961 1025 aa33.4■■■□□ 2.94
YIF1A-201ENST00000359461 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.93
YIF1A-201ENST00000359461 FAM196AQ6ZSG2 479 aa33.38■■■□□ 2.93
YIF1A-201ENST00000359461 SLIT3O75094 1523 aa33.37■■■□□ 2.93
YIF1A-201ENST00000359461 SRPK2P78362 688 aaKnown RBP33.36■■■□□ 2.93
YIF1A-201ENST00000359461 COL5A2P05997 1499 aaPredicted RBP33.36■■■□□ 2.93
YIF1A-201ENST00000359461 NUP188Q5SRE5 1749 aa33.36■■■□□ 2.93
YIF1A-201ENST00000359461 PIK3C2AO00443 1686 aa33.35■■■□□ 2.93
YIF1A-201ENST00000359461 USP6P35125 1406 aa33.35■■■□□ 2.93
YIF1A-201ENST00000359461 PARD3Q8TEW0 1356 aa33.34■■■□□ 2.93
YIF1A-201ENST00000359461 LARP1Q6PKG0 1096 aaKnown RBP33.33■■■□□ 2.93
YIF1A-201ENST00000359461 NLRP13Q86W25 1043 aa33.33■■■□□ 2.93
YIF1A-201ENST00000359461 CAMKK2Q96RR4 588 aa33.33■■■□□ 2.93
YIF1A-201ENST00000359461 CABP2Q9NPB3 220 aa33.33■■■□□ 2.93
YIF1A-201ENST00000359461 USP35Q9P2H5 1018 aa33.33■■■□□ 2.93
YIF1A-201ENST00000359461 TRIM37O94972 964 aa33.32■■■□□ 2.92
YIF1A-201ENST00000359461 EVA1CP58658 441 aa33.32■■■□□ 2.92
YIF1A-201ENST00000359461 EZH2Q15910 746 aaKnown RBP33.32■■■□□ 2.92
YIF1A-201ENST00000359461 WNK3Q9BYP7 1800 aa33.31■■■□□ 2.92
YIF1A-201ENST00000359461 GCP02774 474 aa33.31■■■□□ 2.92
YIF1A-201ENST00000359461 TCP11L2Q8N4U5 519 aa33.31■■■□□ 2.92
YIF1A-201ENST00000359461 COL18A1P39060 1754 aa33.31■■■□□ 2.92
YIF1A-201ENST00000359461 PEAK1Q9H792 1746 aa33.3■■■□□ 2.92
YIF1A-201ENST00000359461 AKAP12Q02952 1782 aa33.29■■■□□ 2.92
YIF1A-201ENST00000359461 R3HDM1Q15032 1099 aaKnown RBP33.28■■■□□ 2.92
YIF1A-201ENST00000359461 THRAP3Q9Y2W1 955 aaKnown RBP33.28■■■□□ 2.92
YIF1A-201ENST00000359461 LRRC37A3O60309 1634 aa33.28■■■□□ 2.92
YIF1A-201ENST00000359461 CRB1P82279 1406 aa33.26■■■□□ 2.91
YIF1A-201ENST00000359461 PDE3BQ13370 1112 aa33.25■■■□□ 2.91
YIF1A-201ENST00000359461 SBF2Q86WG5 1849 aa33.25■■■□□ 2.91
YIF1A-201ENST00000359461 RGPD3A6NKT7 1758 aaPredicted RBP33.24■■■□□ 2.91
YIF1A-201ENST00000359461 RGPD4Q7Z3J3 1758 aa33.24■■■□□ 2.91
YIF1A-201ENST00000359461 L3MBTL2Q969R5 705 aa33.24■■■□□ 2.91
YIF1A-201ENST00000359461 CABP1Q9NZU7 370 aa33.24■■■□□ 2.91
YIF1A-201ENST00000359461 AATKQ6ZMQ8 1374 aa33.23■■■□□ 2.91
YIF1A-201ENST00000359461 APBA3O96018 575 aa33.23■■■□□ 2.91
YIF1A-201ENST00000359461 RGPD5Q99666 1765 aa33.19■■■□□ 2.9
YIF1A-201ENST00000359461 NLRP6P59044 892 aa33.18■■■□□ 2.9
YIF1A-201ENST00000359461 EVC2Q86UK5 1308 aa33.18■■■□□ 2.9
YIF1A-201ENST00000359461 OVOS2A0A0G2JMS6 1433 aa33.16■■■□□ 2.9
YIF1A-201ENST00000359461 OVOS2A0A0J9YW53 1432 aa33.16■■■□□ 2.9
YIF1A-201ENST00000359461 OVOS2Q6IE36 1432 aa33.16■■■□□ 2.9
YIF1A-201ENST00000359461 CPSF1Q10570 1443 aaKnown RBP33.15■■■□□ 2.9
YIF1A-201ENST00000359461 MON2Q7Z3U7 1717 aa33.15■■■□□ 2.9
YIF1A-201ENST00000359461 C11orf95C9JLR9 678 aaPredicted RBP33.13■■■□□ 2.89
YIF1A-201ENST00000359461 ROCK2O75116 1388 aaKnown RBP33.11■■■□□ 2.89
YIF1A-201ENST00000359461 USP54Q70EL1 1684 aa33.11■■■□□ 2.89
YIF1A-201ENST00000359461 NFAT5O94916 1531 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms