RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PLEKHG1Q9ULL1 1385 aa19.53■□□□□ 0.72
GABPB1-202ENST00000359031 AKAP12Q02952 1782 aa19.53■□□□□ 0.72
GABPB1-202ENST00000359031 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
GABPB1-202ENST00000359031 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
GABPB1-202ENST00000359031 SLIT1O75093 1534 aa19.52■□□□□ 0.72
GABPB1-202ENST00000359031 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
GABPB1-202ENST00000359031 FYB1O15117 783 aa19.51■□□□□ 0.71
GABPB1-202ENST00000359031 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
GABPB1-202ENST00000359031 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
GABPB1-202ENST00000359031 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-202ENST00000359031 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-202ENST00000359031 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
GABPB1-202ENST00000359031 CPSF1Q10570 1443 aaKnown RBP19.5■□□□□ 0.71
GABPB1-202ENST00000359031 EDC4Q6P2E9 1401 aaKnown RBP19.5■□□□□ 0.71
GABPB1-202ENST00000359031 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
GABPB1-202ENST00000359031 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
GABPB1-202ENST00000359031 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
GABPB1-202ENST00000359031 CCDC27Q2M243 656 aa19.48■□□□□ 0.71
GABPB1-202ENST00000359031 WWC1Q8IX03 1113 aa19.48■□□□□ 0.71
GABPB1-202ENST00000359031 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
GABPB1-202ENST00000359031 PLIN1O60240 522 aa19.46■□□□□ 0.71
GABPB1-202ENST00000359031 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
GABPB1-202ENST00000359031 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
GABPB1-202ENST00000359031 PNPLA6Q8IY17 1366 aa19.45■□□□□ 0.7
GABPB1-202ENST00000359031 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
GABPB1-202ENST00000359031 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
GABPB1-202ENST00000359031 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
GABPB1-202ENST00000359031 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
GABPB1-202ENST00000359031 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
GABPB1-202ENST00000359031 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
GABPB1-202ENST00000359031 ROBO2Q9HCK4 1378 aa19.43■□□□□ 0.7
GABPB1-202ENST00000359031 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
GABPB1-202ENST00000359031 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
GABPB1-202ENST00000359031 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
GABPB1-202ENST00000359031 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
GABPB1-202ENST00000359031 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
GABPB1-202ENST00000359031 LTKP29376 864 aa19.4■□□□□ 0.7
GABPB1-202ENST00000359031 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
GABPB1-202ENST00000359031 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
GABPB1-202ENST00000359031 PTCH1Q13635 1447 aa19.4■□□□□ 0.7
GABPB1-202ENST00000359031 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
GABPB1-202ENST00000359031 RRP7AQ9Y3A4 280 aaKnown RBP19.39■□□□□ 0.69
GABPB1-202ENST00000359031 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
GABPB1-202ENST00000359031 XRN1Q8IZH2 1706 aaKnown RBP19.38■□□□□ 0.69
GABPB1-202ENST00000359031 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
GABPB1-202ENST00000359031 C20orf194Q5TEA3 1177 aa19.38■□□□□ 0.69
GABPB1-202ENST00000359031 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
GABPB1-202ENST00000359031 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
GABPB1-202ENST00000359031 PTPRUQ92729 1446 aa19.37■□□□□ 0.69
GABPB1-202ENST00000359031 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
GABPB1-202ENST00000359031 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
GABPB1-202ENST00000359031 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.36■□□□□ 0.69
GABPB1-202ENST00000359031 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
GABPB1-202ENST00000359031 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
GABPB1-202ENST00000359031 ZNF692Q9BU19 519 aaPredicted RBP19.35■□□□□ 0.69
GABPB1-202ENST00000359031 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
GABPB1-202ENST00000359031 TBX22Q9Y458 520 aa19.34■□□□□ 0.69
GABPB1-202ENST00000359031 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
GABPB1-202ENST00000359031 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
GABPB1-202ENST00000359031 POLKQ9UBT6 870 aa19.33■□□□□ 0.68
GABPB1-202ENST00000359031 BCAR3O75815 825 aa19.32■□□□□ 0.68
GABPB1-202ENST00000359031 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
GABPB1-202ENST00000359031 PDE3AQ14432 1141 aa19.32■□□□□ 0.68
GABPB1-202ENST00000359031 NME9Q86XW9 330 aa19.31■□□□□ 0.68
GABPB1-202ENST00000359031 IL16Q14005 1332 aa19.31■□□□□ 0.68
GABPB1-202ENST00000359031 COG3Q96JB2 828 aa19.3■□□□□ 0.68
GABPB1-202ENST00000359031 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
GABPB1-202ENST00000359031 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
GABPB1-202ENST00000359031 FCHSD2O94868 740 aa19.29■□□□□ 0.68
GABPB1-202ENST00000359031 CT47B1P0C2W7 299 aaPredicted RBP19.29■□□□□ 0.68
GABPB1-202ENST00000359031 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
GABPB1-202ENST00000359031 PLEKHG3A1L390 1219 aa19.29■□□□□ 0.68
GABPB1-202ENST00000359031 MS4A1P11836 297 aa19.29■□□□□ 0.68
GABPB1-202ENST00000359031 CENPQQ7L2Z9 268 aaPredicted RBP19.29■□□□□ 0.68
GABPB1-202ENST00000359031 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
GABPB1-202ENST00000359031 RARSP54136 660 aaKnown RBP19.28■□□□□ 0.68
GABPB1-202ENST00000359031 USP6P35125 1406 aa19.28■□□□□ 0.68
GABPB1-202ENST00000359031 OVOS2A0A0J9YW53 1432 aa19.27■□□□□ 0.68
GABPB1-202ENST00000359031 OVOS2Q6IE36 1432 aa19.27■□□□□ 0.68
GABPB1-202ENST00000359031 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
GABPB1-202ENST00000359031 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
GABPB1-202ENST00000359031 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
GABPB1-202ENST00000359031 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
GABPB1-202ENST00000359031 NEFMP07197 916 aa19.25■□□□□ 0.67
GABPB1-202ENST00000359031 FMN2Q9NZ56 1722 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 XIRP1Q702N8 1843 aaKnown RBP19.24■□□□□ 0.67
GABPB1-202ENST00000359031 AAMPQ13685 434 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 ACEP12821 1306 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 SSH2Q76I76 1423 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 ANKARQ7Z5J8 1434 aa19.24■□□□□ 0.67
GABPB1-202ENST00000359031 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
GABPB1-202ENST00000359031 IL13P35225 146 aa19.23■□□□□ 0.67
GABPB1-202ENST00000359031 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
GABPB1-202ENST00000359031 RIPK4P57078 832 aa19.22■□□□□ 0.67
GABPB1-202ENST00000359031 ZRANB1Q9UGI0 708 aa19.22■□□□□ 0.67
GABPB1-202ENST00000359031 PRKAR2BP31323 418 aa19.22■□□□□ 0.67
GABPB1-202ENST00000359031 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms