RNA–Protein interactions for RNA: ENST00000359013.4

TGFBR2-202, Transcript of transforming growth factor beta receptor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TGFBR2, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR2-202ENST00000359013 HOOK1Q9UJC3 728 aaKnown RBP18.63■□□□□ 0.57
TGFBR2-202ENST00000359013 POLR3GO15318 223 aaPredicted RBP18.62■□□□□ 0.57
TGFBR2-202ENST00000359013 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
TGFBR2-202ENST00000359013 TNNT1P13805 278 aa18.62■□□□□ 0.57
TGFBR2-202ENST00000359013 TIGD1Q96MW7 591 aa18.62■□□□□ 0.57
TGFBR2-202ENST00000359013 OLFM4Q6UX06 510 aa18.62■□□□□ 0.57
TGFBR2-202ENST00000359013 NUP62CLQ9H1M0 184 aa18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 TRIM29Q14134 588 aa18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 C9orf78Q9NZ63 289 aaPredicted RBP18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 ZNF830Q96NB3 372 aaPredicted RBP18.61■□□□□ 0.57
TGFBR2-202ENST00000359013 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
TGFBR2-202ENST00000359013 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
TGFBR2-202ENST00000359013 LTV1Q96GA3 475 aaPredicted RBP18.6■□□□□ 0.57
TGFBR2-202ENST00000359013 EIF2S2P20042 333 aaKnown RBP18.6■□□□□ 0.57
TGFBR2-202ENST00000359013 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
TGFBR2-202ENST00000359013 ZSCAN23Q3MJ62 389 aa18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 CCDC94Q9BW85 323 aaPredicted RBP18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 EIF3JO75822 258 aaKnown RBP18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 ADCY5O95622 1261 aa18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 AMPHP49418 695 aa18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 WWC1Q8IX03 1113 aa18.59■□□□□ 0.57
TGFBR2-202ENST00000359013 WDR63Q8IWG1 891 aa18.58■□□□□ 0.57
TGFBR2-202ENST00000359013 KIF18AQ8NI77 898 aa18.58■□□□□ 0.57
TGFBR2-202ENST00000359013 LARP1BQ659C4 914 aaKnown RBP18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 PSMA5P28066 241 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 CAMK4Q16566 473 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 GTPBP4Q9BZE4 634 aaKnown RBP18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 USP8P40818 1118 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 GDPD2Q9HCC8 539 aa18.58■□□□□ 0.56
TGFBR2-202ENST00000359013 ERLIN1O75477 346 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 SERPINC1P01008 464 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 DUSP27Q5VZP5 1158 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 CCDC102AQ96A19 550 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 IGF1RP08069 1367 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 HFM1A2PYH4 1435 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 KIAA0754O94854 1291 aa18.57■□□□□ 0.56
TGFBR2-202ENST00000359013 NOLC1Q14978 699 aaKnown RBP eCLIP18.57■□□□□ 0.569e-6■□□□□ 9.6
TGFBR2-202ENST00000359013 CDR1P51861 262 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 CNTROBQ8N137 903 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 GPATCH11Q8N954 259 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 AKAP17AQ02040 695 aaKnown RBP18.56■□□□□ 0.56
TGFBR2-202ENST00000359013 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
TGFBR2-202ENST00000359013 NAP1L1P55209 391 aaKnown RBP18.55■□□□□ 0.56
TGFBR2-202ENST00000359013 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
TGFBR2-202ENST00000359013 RARSP54136 660 aaKnown RBP18.55■□□□□ 0.56
TGFBR2-202ENST00000359013 COG3Q96JB2 828 aa18.55■□□□□ 0.56
TGFBR2-202ENST00000359013 SPATA32Q96LK8 384 aa18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 NOL10Q9BSC4 688 aaKnown RBP18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 TRMT1Q9NXH9 659 aaKnown RBP18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.564e-7■□□□□ 8.7
TGFBR2-202ENST00000359013 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 HSP90AB4PQ58FF6 505 aa18.54■□□□□ 0.56
TGFBR2-202ENST00000359013 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 ME1P48163 572 aa18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 FERMT3Q86UX7 667 aa18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 CYP46A1Q9Y6A2 500 aa18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 STK3Q13188 491 aa18.53■□□□□ 0.56
TGFBR2-202ENST00000359013 KIF2AO00139 706 aaPredicted RBP18.52■□□□□ 0.56
TGFBR2-202ENST00000359013 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
TGFBR2-202ENST00000359013 KRT222Q8N1A0 295 aa18.52■□□□□ 0.56
TGFBR2-202ENST00000359013 IPO4Q8TEX9 1081 aaKnown RBP18.52■□□□□ 0.56
TGFBR2-202ENST00000359013 BRPF1P55201 1214 aaPredicted RBP18.52■□□□□ 0.55
TGFBR2-202ENST00000359013 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.55
TGFBR2-202ENST00000359013 CEP57L1Q8IYX8 460 aa18.52■□□□□ 0.55
TGFBR2-202ENST00000359013 ANKRD50Q9ULJ7 1429 aa18.52■□□□□ 0.55
TGFBR2-202ENST00000359013 DHX37Q8IY37 1157 aaKnown RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 PLCD4Q9BRC7 762 aa18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 STK38Q15208 465 aa18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 URI1O94763 535 aaPredicted RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 DHX8Q14562 1220 aaKnown RBP18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
TGFBR2-202ENST00000359013 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 CENPHQ9H3R5 247 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 CLIP2Q9UDT6 1046 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 PRKAR2BP31323 418 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 FAM193AP78312 1265 aa18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 RRP12Q5JTH9 1297 aaKnown RBP18.5■□□□□ 0.55
TGFBR2-202ENST00000359013 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms