RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 UBTFL1P0CB47 393 aaPredicted RBP24.37■■□□□ 1.49
EDC4-201ENST00000358933 DCTN1Q14203 1278 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 C20orf194Q5TEA3 1177 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 CAGE1Q8TC20 777 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 TSR2Q969E8 191 aaKnown RBP24.36■■□□□ 1.49
EDC4-201ENST00000358933 TSPYL4Q9UJ04 414 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 DYNC1I1O14576 645 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 CCDC191Q8NCU4 936 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 GGNBP2Q9H3C7 697 aa24.36■■□□□ 1.49
EDC4-201ENST00000358933 AXDND1Q5T1B0 1012 aaPredicted RBP24.35■■□□□ 1.49
EDC4-201ENST00000358933 TSPYL1Q9H0U9 437 aa24.35■■□□□ 1.49
EDC4-201ENST00000358933 TNPO1Q92973 898 aaKnown RBP24.35■■□□□ 1.49
EDC4-201ENST00000358933 EIF3JO75822 258 aaKnown RBP24.35■■□□□ 1.49
EDC4-201ENST00000358933 CLASRPQ8N2M8 674 aaKnown RBP24.34■■□□□ 1.49
EDC4-201ENST00000358933 ERLIN1O75477 346 aa24.34■■□□□ 1.49
EDC4-201ENST00000358933 ZHX1Q9UKY1 873 aaPredicted RBP24.33■■□□□ 1.49
EDC4-201ENST00000358933 JPH4Q96JJ6 628 aa24.33■■□□□ 1.49
EDC4-201ENST00000358933 ZNF396Q96N95 335 aaPredicted RBP24.33■■□□□ 1.49
EDC4-201ENST00000358933 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 TTLL5Q6EMB2 1281 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 NUTM2FA1L443 756 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 NBPF1Q3BBV0 1214 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 SURF6O75683 361 aaKnown RBP24.32■■□□□ 1.48
EDC4-201ENST00000358933 DDX58O95786 925 aaKnown RBP24.32■■□□□ 1.48
EDC4-201ENST00000358933 NAP1L1P55209 391 aaKnown RBP24.32■■□□□ 1.48
EDC4-201ENST00000358933 DEF6Q9H4E7 631 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 NUP62CLQ9H1M0 184 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 CALCOCO1Q9P1Z2 691 aa24.32■■□□□ 1.48
EDC4-201ENST00000358933 USP8P40818 1118 aa24.31■■□□□ 1.48
EDC4-201ENST00000358933 TWISTNBQ3B726 338 aaPredicted RBP24.31■■□□□ 1.48
EDC4-201ENST00000358933 RRP12Q5JTH9 1297 aaKnown RBP24.31■■□□□ 1.48
EDC4-201ENST00000358933 RALYLQ86SE5 291 aaKnown RBP24.31■■□□□ 1.48
EDC4-201ENST00000358933 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
EDC4-201ENST00000358933 MAPK8IP2Q13387 824 aaPredicted RBP24.31■■□□□ 1.48
EDC4-201ENST00000358933 NFXL1Q6ZNB6 911 aa24.31■■□□□ 1.48
EDC4-201ENST00000358933 UBXN4Q92575 508 aa24.31■■□□□ 1.48
EDC4-201ENST00000358933 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
EDC4-201ENST00000358933 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
EDC4-201ENST00000358933 SCAPERQ9BY12 1400 aa24.3■■□□□ 1.48
EDC4-201ENST00000358933 CYP46A1Q9Y6A2 500 aa24.3■■□□□ 1.48
EDC4-201ENST00000358933 KIF2AO00139 706 aaPredicted RBP24.3■■□□□ 1.48
EDC4-201ENST00000358933 SMARCE1Q969G3 411 aa24.3■■□□□ 1.48
EDC4-201ENST00000358933 FILIP1Q7Z7B0 1213 aa24.3■■□□□ 1.48
EDC4-201ENST00000358933 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
EDC4-201ENST00000358933 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
EDC4-201ENST00000358933 FSD1Q9BTV5 496 aa24.29■■□□□ 1.48
EDC4-201ENST00000358933 SERPINC1P01008 464 aa24.28■■□□□ 1.48
EDC4-201ENST00000358933 FILIP1LQ4L180 1135 aa24.28■■□□□ 1.48
EDC4-201ENST00000358933 LARP1BQ659C4 914 aaKnown RBP24.28■■□□□ 1.48
EDC4-201ENST00000358933 STK38Q15208 465 aa24.28■■□□□ 1.48
EDC4-201ENST00000358933 HIP1O00291 1037 aa24.27■■□□□ 1.48
EDC4-201ENST00000358933 SSFA2P28290 1259 aa24.27■■□□□ 1.48
EDC4-201ENST00000358933 TMCO3Q6UWJ1 677 aa24.27■■□□□ 1.48
EDC4-201ENST00000358933 KIAA0754O94854 1291 aa24.27■■□□□ 1.48
EDC4-201ENST00000358933 CEBPZQ03701 1054 aaKnown RBP24.27■■□□□ 1.48
EDC4-201ENST00000358933 SKIDA1Q1XH10 827 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 GNAI2P04899 355 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 KIAA1107Q9UPP5 1409 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 ANKRD1Q15327 319 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 PTPN14Q15678 1187 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 MAP3K11Q16584 847 aa24.26■■□□□ 1.47
EDC4-201ENST00000358933 CEP57L1Q8IYX8 460 aa24.25■■□□□ 1.47
EDC4-201ENST00000358933 PDIA4P13667 645 aaKnown RBP24.25■■□□□ 1.47
EDC4-201ENST00000358933 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
EDC4-201ENST00000358933 PPP4R3BQ5MIZ7 849 aa24.24■■□□□ 1.47
EDC4-201ENST00000358933 PRIMPOLQ96LW4 560 aa24.24■■□□□ 1.47
EDC4-201ENST00000358933 NCBP3Q53F19 620 aaKnown RBP24.24■■□□□ 1.47
EDC4-201ENST00000358933 WWC1Q8IX03 1113 aa24.24■■□□□ 1.47
EDC4-201ENST00000358933 SPATA32Q96LK8 384 aa24.24■■□□□ 1.47
EDC4-201ENST00000358933 CCDC183Q5T5S1 534 aa24.23■■□□□ 1.47
EDC4-201ENST00000358933 KLHL40Q2TBA0 621 aa24.23■■□□□ 1.47
EDC4-201ENST00000358933 TBC1D32Q96NH3 1257 aa24.23■■□□□ 1.47
EDC4-201ENST00000358933 HSP90AB3PQ58FF7 597 aa24.23■■□□□ 1.47
EDC4-201ENST00000358933 FAM177A1Q8N128 213 aaPredicted RBP24.22■■□□□ 1.47
EDC4-201ENST00000358933 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
EDC4-201ENST00000358933 KIF18AQ8NI77 898 aa24.22■■□□□ 1.47
EDC4-201ENST00000358933 LRRCC1Q9C099 1032 aa24.22■■□□□ 1.47
EDC4-201ENST00000358933 ME1P48163 572 aa24.22■■□□□ 1.47
EDC4-201ENST00000358933 ZSCAN31Q96LW9 406 aaPredicted RBP24.22■■□□□ 1.47
EDC4-201ENST00000358933 ERICH2A1L162 156 aa24.22■■□□□ 1.47
EDC4-201ENST00000358933 CBFA2T2O43439 604 aa24.21■■□□□ 1.47
EDC4-201ENST00000358933 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
EDC4-201ENST00000358933 JMYQ8N9B5 988 aa24.21■■□□□ 1.47
EDC4-201ENST00000358933 USP25Q9UHP3 1055 aa24.21■■□□□ 1.47
EDC4-201ENST00000358933 CFTRP13569 1480 aa24.2■■□□□ 1.46
EDC4-201ENST00000358933 PANK2Q9BZ23 570 aa24.2■■□□□ 1.46
EDC4-201ENST00000358933 SRCIN1Q9C0H9 1055 aa24.2■■□□□ 1.46
EDC4-201ENST00000358933 DHX16O60231 1041 aaKnown RBP24.19■■□□□ 1.46
EDC4-201ENST00000358933 VPS53Q5VIR6 699 aa24.19■■□□□ 1.46
EDC4-201ENST00000358933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.461e-6■■□□□ 13.5
EDC4-201ENST00000358933 CFAP45Q9UL16 551 aa24.19■■□□□ 1.46
EDC4-201ENST00000358933 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
EDC4-201ENST00000358933 TMEM57Q8N5G2 664 aa24.19■■□□□ 1.46
EDC4-201ENST00000358933 PPFIBP1Q86W92 1011 aa24.18■■□□□ 1.46
EDC4-201ENST00000358933 UPF3BQ9BZI7 483 aaKnown RBP24.18■■□□□ 1.46
EDC4-201ENST00000358933 CCDC30Q5VVM6 783 aa24.18■■□□□ 1.46
EDC4-201ENST00000358933 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
EDC4-201ENST00000358933 BAG4O95429 457 aaKnown RBP24.18■■□□□ 1.46
EDC4-201ENST00000358933 CABP2Q9NPB3 220 aa24.18■■□□□ 1.46
EDC4-201ENST00000358933 TNNT1P13805 278 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms