RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NSD3Q9BZ95 1437 aa20.98■□□□□ 0.95
TPM1-206ENST00000358278 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
TPM1-206ENST00000358278 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
TPM1-206ENST00000358278 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
TPM1-206ENST00000358278 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
TPM1-206ENST00000358278 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
TPM1-206ENST00000358278 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
TPM1-206ENST00000358278 SBNO1A3KN83 1393 aa20.95■□□□□ 0.94
TPM1-206ENST00000358278 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.94
TPM1-206ENST00000358278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
TPM1-206ENST00000358278 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
TPM1-206ENST00000358278 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
TPM1-206ENST00000358278 CARD14Q9BXL6 1004 aa20.94■□□□□ 0.94
TPM1-206ENST00000358278 TTC21BQ7Z4L5 1316 aa20.94■□□□□ 0.94
TPM1-206ENST00000358278 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
TPM1-206ENST00000358278 TTC21AQ8NDW8 1320 aa20.92■□□□□ 0.94
TPM1-206ENST00000358278 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
TPM1-206ENST00000358278 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
TPM1-206ENST00000358278 SPATA31A3Q5VYP0 1347 aa20.91■□□□□ 0.94
TPM1-206ENST00000358278 HSPA1LP34931 641 aa20.91■□□□□ 0.94
TPM1-206ENST00000358278 LRRC59Q96AG4 307 aaKnown RBP20.91■□□□□ 0.94
TPM1-206ENST00000358278 MARF1Q9Y4F3 1742 aaKnown RBP20.91■□□□□ 0.94
TPM1-206ENST00000358278 USP54Q70EL1 1684 aa20.91■□□□□ 0.94
TPM1-206ENST00000358278 ARHGEF10O15013 1369 aa20.9■□□□□ 0.94
TPM1-206ENST00000358278 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
TPM1-206ENST00000358278 ABTB2Q8N961 1025 aa20.9■□□□□ 0.94
TPM1-206ENST00000358278 ABCA3Q99758 1704 aa20.89■□□□□ 0.93
TPM1-206ENST00000358278 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
TPM1-206ENST00000358278 CRYBG1Q9Y4K1 1723 aa20.88■□□□□ 0.93
TPM1-206ENST00000358278 NME9Q86XW9 330 aa20.87■□□□□ 0.93
TPM1-206ENST00000358278 PHRF1Q9P1Y6 1649 aaKnown RBP20.87■□□□□ 0.93
TPM1-206ENST00000358278 NUTM2GQ5VZR2 741 aa20.87■□□□□ 0.93
TPM1-206ENST00000358278 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
TPM1-206ENST00000358278 MED1Q15648 1581 aaPredicted RBP20.86■□□□□ 0.93
TPM1-206ENST00000358278 NLRP6P59044 892 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 NSD2O96028 1365 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 PNPLA6Q8IY17 1366 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 FYB1O15117 783 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 PLEKHG5O94827 1062 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 GGNBP2Q9H3C7 697 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 JCADQ9P266 1359 aa20.84■□□□□ 0.93
TPM1-206ENST00000358278 NLRP13Q86W25 1043 aa20.83■□□□□ 0.92
TPM1-206ENST00000358278 OVOS2A0A0J9YW53 1432 aa20.83■□□□□ 0.92
TPM1-206ENST00000358278 OVOS2Q6IE36 1432 aa20.83■□□□□ 0.92
TPM1-206ENST00000358278 CNGB1Q14028 1251 aaPredicted RBP20.82■□□□□ 0.92
TPM1-206ENST00000358278 COG3Q96JB2 828 aa20.82■□□□□ 0.92
TPM1-206ENST00000358278 USP31Q70CQ4 1352 aa20.81■□□□□ 0.92
TPM1-206ENST00000358278 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
TPM1-206ENST00000358278 ZRANB1Q9UGI0 708 aa20.81■□□□□ 0.92
TPM1-206ENST00000358278 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
TPM1-206ENST00000358278 MAP2P11137 1827 aaKnown RBP20.8■□□□□ 0.92
TPM1-206ENST00000358278 LTN1O94822 1766 aa20.8■□□□□ 0.92
TPM1-206ENST00000358278 SLIT3O75094 1523 aa20.79■□□□□ 0.92
TPM1-206ENST00000358278 NPC1L1Q9UHC9 1359 aa20.79■□□□□ 0.92
TPM1-206ENST00000358278 HAP1P54257 671 aaPredicted RBP20.78■□□□□ 0.92
TPM1-206ENST00000358278 USP19O94966 1318 aa20.78■□□□□ 0.92
TPM1-206ENST00000358278 CABLES1Q8TDN4 633 aa20.78■□□□□ 0.92
TPM1-206ENST00000358278 SOX12O15370 315 aa20.76■□□□□ 0.91
TPM1-206ENST00000358278 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
TPM1-206ENST00000358278 NFAT5O94916 1531 aa20.75■□□□□ 0.91
TPM1-206ENST00000358278 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
TPM1-206ENST00000358278 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
TPM1-206ENST00000358278 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-206ENST00000358278 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-206ENST00000358278 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-206ENST00000358278 GCP02774 474 aa20.73■□□□□ 0.91
TPM1-206ENST00000358278 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
TPM1-206ENST00000358278 RGPD5Q99666 1765 aa20.7■□□□□ 0.9
TPM1-206ENST00000358278 ILDR1Q86SU0 546 aaPredicted RBP20.7■□□□□ 0.9
TPM1-206ENST00000358278 ZC3H6P61129 1189 aaKnown RBP20.69■□□□□ 0.9
TPM1-206ENST00000358278 LRP6O75581 1613 aa20.69■□□□□ 0.9
TPM1-206ENST00000358278 PARD3Q8TEW0 1356 aa20.68■□□□□ 0.9
TPM1-206ENST00000358278 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
TPM1-206ENST00000358278 PLCH1Q4KWH8 1693 aa20.68■□□□□ 0.9
TPM1-206ENST00000358278 COL14A1Q05707 1796 aaKnown RBP20.67■□□□□ 0.9
TPM1-206ENST00000358278 ADAMTS2O95450 1211 aa20.67■□□□□ 0.9
TPM1-206ENST00000358278 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
TPM1-206ENST00000358278 KIAA0232Q92628 1395 aa20.67■□□□□ 0.9
TPM1-206ENST00000358278 FBLN1P23142 703 aa20.67■□□□□ 0.9
TPM1-206ENST00000358278 AATKQ6ZMQ8 1374 aa20.66■□□□□ 0.9
TPM1-206ENST00000358278 ANP32CO43423 234 aa20.66■□□□□ 0.9
TPM1-206ENST00000358278 RRS1Q15050 365 aaKnown RBP20.66■□□□□ 0.9
TPM1-206ENST00000358278 RALBP1Q15311 655 aa20.66■□□□□ 0.9
TPM1-206ENST00000358278 CPDO75976 1380 aa20.66■□□□□ 0.9
TPM1-206ENST00000358278 PEAK1Q9H792 1746 aa20.66■□□□□ 0.9
TPM1-206ENST00000358278 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
TPM1-206ENST00000358278 COL18A1P39060 1754 aa20.65■□□□□ 0.9
TPM1-206ENST00000358278 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.9
TPM1-206ENST00000358278 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.89
TPM1-206ENST00000358278 MAP3K19Q56UN5 1328 aa20.63■□□□□ 0.89
TPM1-206ENST00000358278 LMO7Q8WWI1 1683 aa20.63■□□□□ 0.89
TPM1-206ENST00000358278 ARHGEF25Q86VW2 580 aa20.63■□□□□ 0.89
TPM1-206ENST00000358278 NWD2Q9ULI1 1742 aa20.63■□□□□ 0.89
TPM1-206ENST00000358278 ABCC6O95255 1503 aa20.63■□□□□ 0.89
TPM1-206ENST00000358278 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
TPM1-206ENST00000358278 AMPHP49418 695 aa20.61■□□□□ 0.89
TPM1-206ENST00000358278 CHRNA2Q15822 529 aa20.61■□□□□ 0.89
TPM1-206ENST00000358278 EMILIN1Q9Y6C2 1016 aa20.61■□□□□ 0.89
TPM1-206ENST00000358278 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
TPM1-206ENST00000358278 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms