RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CPLX2Q6PUV4 134 aaKnown RBP4.93□□□□□ -1.62
SYNE2-204ENST00000358025 CHD1LQ86WJ1 897 aa4.93□□□□□ -1.62
SYNE2-204ENST00000358025 UBE2HP62256 183 aa4.93□□□□□ -1.62
SYNE2-204ENST00000358025 TROQ12816 1431 aaPredicted RBP4.93□□□□□ -1.62
SYNE2-204ENST00000358025 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
SYNE2-204ENST00000358025 COG6Q9Y2V7 657 aa4.93□□□□□ -1.62
SYNE2-204ENST00000358025 KRT32Q14532 448 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 RAB11FIP3O75154 756 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 CDR1P51861 262 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 SYCP1Q15431 976 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 KAT6BQ8WYB5 2073 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 KIF24Q5T7B8 1368 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 CCDC112Q8NEF3 446 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 CCDC183Q5T5S1 534 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 DNAAF4Q8WXU2 420 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 GBP3Q9H0R5 595 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 ABCA10Q8WWZ4 1543 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 PLIN1O60240 522 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 EIF3JO75822 258 aaKnown RBP4.92□□□□□ -1.62
SYNE2-204ENST00000358025 RALGAPBQ86X10 1494 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 PIK3C2GO75747 1445 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 ANKRD20A12PQ8NF67 263 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 DDX19AQ9NUU7 478 aaKnown RBP4.92□□□□□ -1.62
SYNE2-204ENST00000358025 FANCD2Q9BXW9 1451 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 FGD1P98174 961 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
SYNE2-204ENST00000358025 MCTP1Q6DN14 999 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 C8orf34Q49A92 452 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 PLCB2Q00722 1185 aa4.92□□□□□ -1.62
SYNE2-204ENST00000358025 CUL7Q14999 1698 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 ESF1Q9H501 851 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 AXDND1Q5T1B0 1012 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 KRT222Q8N1A0 295 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 TXLNBQ8N3L3 684 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 U2SURPO15042 1029 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 SPAG9O60271 1321 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 PER1O15534 1290 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 CCT4P50991 539 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 MAP9Q49MG5 647 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 CAGE1Q8TC20 777 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 POGKQ9P215 609 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 TRMT2AQ8IZ69 625 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 LRSAM1Q6UWE0 723 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 TCP11L2Q8N4U5 519 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 SLC52A1Q9NWF4 448 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 CCDC171Q6TFL3 1326 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 ZNF396Q96N95 335 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 IPO7O95373 1038 aaKnown RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 PIP4K2AP48426 406 aaPredicted RBP4.91□□□□□ -1.62
SYNE2-204ENST00000358025 ANTXR1Q9H6X2 564 aa4.91□□□□□ -1.62
SYNE2-204ENST00000358025 ATP8B1O43520 1251 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 MNS1Q8NEH6 495 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 TCOF1Q13428 1488 aaKnown RBP4.9□□□□□ -1.62
SYNE2-204ENST00000358025 CC2D2AQ9P2K1 1620 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 CCDC184Q52MB2 194 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 MYRIPQ8NFW9 859 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 R3HCC1Q9Y3T6 440 aaKnown RBP4.9□□□□□ -1.62
SYNE2-204ENST00000358025 ERCC6Q03468 1493 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 MTHFSP49914 203 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 LEKR1Q6ZMV7 388 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 CBFA2T2O43439 604 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 JMYQ8N9B5 988 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 SMC3Q9UQE7 1217 aa4.9□□□□□ -1.62
SYNE2-204ENST00000358025 PTPRCP08575 1304 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 NAP1L2Q9ULW6 460 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 SF3B2Q13435 895 aaKnown RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 IQCEQ6IPM2 695 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 ERBINQ96RT1 1412 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 RDXP35241 583 aaKnown RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC83Q8IWF9 413 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 ZNF692Q9BU19 519 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 FILIP1Q7Z7B0 1213 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 EIF4G1Q04637 1599 aaKnown RBP4.9□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC141Q6ZP82 1450 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 NEK4P51957 841 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC73Q6ZRK6 1079 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 HOMER1Q86YM7 354 aa4.9□□□□□ -1.63
SYNE2-204ENST00000358025 UTP14AQ9BVJ6 771 aaKnown RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 MICALCLQ6ZW33 695 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 UBXN4Q92575 508 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 MYO6Q9UM54 1294 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 MX1P20591 662 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 IFT57Q9NWB7 429 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 TEX14Q8IWB6 1497 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 POLR3AO14802 1390 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 CDCA7LQ96GN5 454 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 ZSCAN23Q3MJ62 389 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC30Q5VVM6 783 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 ERLIN1O75477 346 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 SLC4A3P48751 1232 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 PANK1Q8TE04 598 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 TNPO1Q92973 898 aaKnown RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 H3BQV1 296 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 PRPF40AO75400 957 aaKnown RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 IFFO2Q5TF58 517 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC50Q8IVM0 306 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 TACO1Q9BSH4 297 aaKnown RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 BAG4O95429 457 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms