RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
CCNE1-202ENST00000357943 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
CCNE1-202ENST00000357943 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
CCNE1-202ENST00000357943 HSPA1LP34931 641 aa20.45■□□□□ 0.86
CCNE1-202ENST00000357943 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
CCNE1-202ENST00000357943 SBNO1A3KN83 1393 aa20.44■□□□□ 0.86
CCNE1-202ENST00000357943 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
CCNE1-202ENST00000357943 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
CCNE1-202ENST00000357943 SPATA31A3Q5VYP0 1347 aa20.44■□□□□ 0.86
CCNE1-202ENST00000357943 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
CCNE1-202ENST00000357943 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
CCNE1-202ENST00000357943 LMOD2Q6P5Q4 547 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
CCNE1-202ENST00000357943 TNS3Q68CZ2 1445 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 NME9Q86XW9 330 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 KNSTRNQ9Y448 316 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
CCNE1-202ENST00000357943 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
CCNE1-202ENST00000357943 FYB1O15117 783 aa20.4■□□□□ 0.86
CCNE1-202ENST00000357943 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
CCNE1-202ENST00000357943 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.86
CCNE1-202ENST00000357943 AMER1Q5JTC6 1135 aaPredicted RBP20.38■□□□□ 0.85
CCNE1-202ENST00000357943 ALS2Q96Q42 1657 aa20.38■□□□□ 0.85
CCNE1-202ENST00000357943 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
CCNE1-202ENST00000357943 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
CCNE1-202ENST00000357943 NLRP6P59044 892 aa20.37■□□□□ 0.85
CCNE1-202ENST00000357943 ARHGEF10O15013 1369 aa20.36■□□□□ 0.85
CCNE1-202ENST00000357943 PLEKHG5O94827 1062 aa20.36■□□□□ 0.85
CCNE1-202ENST00000357943 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
CCNE1-202ENST00000357943 CNGB1Q14028 1251 aaPredicted RBP20.35■□□□□ 0.85
CCNE1-202ENST00000357943 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
CCNE1-202ENST00000357943 NLRP13Q86W25 1043 aa20.34■□□□□ 0.85
CCNE1-202ENST00000357943 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
CCNE1-202ENST00000357943 OVOS2A0A0J9YW53 1432 aa20.33■□□□□ 0.85
CCNE1-202ENST00000357943 OVOS2Q6IE36 1432 aa20.33■□□□□ 0.85
CCNE1-202ENST00000357943 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.84
CCNE1-202ENST00000357943 JCADQ9P266 1359 aa20.33■□□□□ 0.84
CCNE1-202ENST00000357943 COG3Q96JB2 828 aa20.32■□□□□ 0.84
CCNE1-202ENST00000357943 NSD2O96028 1365 aa20.31■□□□□ 0.84
CCNE1-202ENST00000357943 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
CCNE1-202ENST00000357943 USP19O94966 1318 aa20.3■□□□□ 0.84
CCNE1-202ENST00000357943 MED1Q15648 1581 aaPredicted RBP20.3■□□□□ 0.84
CCNE1-202ENST00000357943 NPC1L1Q9UHC9 1359 aa20.3■□□□□ 0.84
CCNE1-202ENST00000357943 SOX12O15370 315 aa20.29■□□□□ 0.84
CCNE1-202ENST00000357943 MARF1Q9Y4F3 1742 aaKnown RBP20.29■□□□□ 0.84
CCNE1-202ENST00000357943 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
CCNE1-202ENST00000357943 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
CCNE1-202ENST00000357943 GCP02774 474 aa20.27■□□□□ 0.84
CCNE1-202ENST00000357943 FBLN1P23142 703 aa20.27■□□□□ 0.84
CCNE1-202ENST00000357943 MORC1Q86VD1 984 aa20.27■□□□□ 0.83
CCNE1-202ENST00000357943 USP54Q70EL1 1684 aa20.26■□□□□ 0.83
CCNE1-202ENST00000357943 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
CCNE1-202ENST00000357943 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
CCNE1-202ENST00000357943 SLIT3O75094 1523 aa20.26■□□□□ 0.83
CCNE1-202ENST00000357943 CRYBG1Q9Y4K1 1723 aa20.25■□□□□ 0.83
CCNE1-202ENST00000357943 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
CCNE1-202ENST00000357943 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
CCNE1-202ENST00000357943 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
CCNE1-202ENST00000357943 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
CCNE1-202ENST00000357943 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
CCNE1-202ENST00000357943 KCNH5Q8NCM2 988 aa20.24■□□□□ 0.83
CCNE1-202ENST00000357943 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
CCNE1-202ENST00000357943 ZC3H6P61129 1189 aaKnown RBP20.23■□□□□ 0.83
CCNE1-202ENST00000357943 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
CCNE1-202ENST00000357943 NFAT5O94916 1531 aa20.22■□□□□ 0.83
CCNE1-202ENST00000357943 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
CCNE1-202ENST00000357943 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
CCNE1-202ENST00000357943 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
CCNE1-202ENST00000357943 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
CCNE1-202ENST00000357943 ADAMTS2O95450 1211 aa20.2■□□□□ 0.82
CCNE1-202ENST00000357943 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
CCNE1-202ENST00000357943 LRP6O75581 1613 aa20.19■□□□□ 0.82
CCNE1-202ENST00000357943 KIAA0232Q92628 1395 aa20.19■□□□□ 0.82
CCNE1-202ENST00000357943 AATKQ6ZMQ8 1374 aa20.18■□□□□ 0.82
CCNE1-202ENST00000357943 ARHGEF25Q86VW2 580 aa20.18■□□□□ 0.82
CCNE1-202ENST00000357943 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
CCNE1-202ENST00000357943 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
CCNE1-202ENST00000357943 RALBP1Q15311 655 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 CPDO75976 1380 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 ANP32CO43423 234 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 CHRNA2Q15822 529 aa20.16■□□□□ 0.82
CCNE1-202ENST00000357943 FAM83GA6ND36 823 aa20.15■□□□□ 0.82
CCNE1-202ENST00000357943 PRDM11Q9NQV5 511 aa20.15■□□□□ 0.82
CCNE1-202ENST00000357943 PPP2R1AP30153 589 aa20.14■□□□□ 0.81
CCNE1-202ENST00000357943 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
CCNE1-202ENST00000357943 AMPHP49418 695 aa20.12■□□□□ 0.81
CCNE1-202ENST00000357943 MTHFSP49914 203 aa20.12■□□□□ 0.81
CCNE1-202ENST00000357943 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
CCNE1-202ENST00000357943 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
CCNE1-202ENST00000357943 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
CCNE1-202ENST00000357943 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
CCNE1-202ENST00000357943 LTN1O94822 1766 aa20.1■□□□□ 0.81
CCNE1-202ENST00000357943 HOXC9P31274 260 aa20.1■□□□□ 0.81
CCNE1-202ENST00000357943 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
CCNE1-202ENST00000357943 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
CCNE1-202ENST00000357943 PEAK1Q9H792 1746 aa20.09■□□□□ 0.81
CCNE1-202ENST00000357943 HSP90AB2PQ58FF8 381 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms