RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 TRMT2AQ8IZ69 625 aaKnown RBP8.43□□□□□ -1.06
RTN4-203ENST00000357376 GRPEL1Q9HAV7 217 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 PRDM15P57071 1507 aaPredicted RBP8.43□□□□□ -1.06
RTN4-203ENST00000357376 NPC1L1Q9UHC9 1359 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 GCC1Q96CN9 775 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 TXNDC2Q86VQ3 553 aa8.43□□□□□ -1.06
RTN4-203ENST00000357376 FCHSD2O94868 740 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 AMPHP49418 695 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 CYB5RLQ6IPT4 315 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 K7ELQ4 463 aaPredicted RBP8.42□□□□□ -1.06
RTN4-203ENST00000357376 FYB1O15117 783 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 KCNJ4P48050 445 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 HSP90AA2PQ14568 343 aaPredicted RBP8.42□□□□□ -1.06
RTN4-203ENST00000357376 INTS3Q68E01 1043 aaKnown RBP8.42□□□□□ -1.06
RTN4-203ENST00000357376 CAVIN1Q6NZI2 390 aaKnown RBP8.42□□□□□ -1.06
RTN4-203ENST00000357376 TTC37Q6PGP7 1564 aa8.42□□□□□ -1.06
RTN4-203ENST00000357376 ATAD2Q6PL18 1390 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 ATP10AO60312 1499 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
RTN4-203ENST00000357376 SULT6B1Q6IMI4 303 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
RTN4-203ENST00000357376 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 NASPP49321 788 aaPredicted RBP8.41□□□□□ -1.06
RTN4-203ENST00000357376 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
RTN4-203ENST00000357376 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 TNPO1Q92973 898 aaKnown RBP8.41□□□□□ -1.06
RTN4-203ENST00000357376 ANO2Q9NQ90 1003 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 SLC52A1Q9NWF4 448 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 REC8O95072 547 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
RTN4-203ENST00000357376 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 NME9Q86XW9 330 aa8.41□□□□□ -1.06
RTN4-203ENST00000357376 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
RTN4-203ENST00000357376 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.06
RTN4-203ENST00000357376 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.06
RTN4-203ENST00000357376 ABCC2Q92887 1545 aa8.4□□□□□ -1.06
RTN4-203ENST00000357376 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
RTN4-203ENST00000357376 UGGT1Q9NYU2 1555 aa8.4□□□□□ -1.06
RTN4-203ENST00000357376 FKBP5Q13451 457 aaPredicted RBP8.4□□□□□ -1.06
RTN4-203ENST00000357376 HDAC1Q13547 482 aaPredicted RBP8.4□□□□□ -1.06
RTN4-203ENST00000357376 POLR1AO95602 1720 aaPredicted RBP8.4□□□□□ -1.07
RTN4-203ENST00000357376 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.07
RTN4-203ENST00000357376 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.07
RTN4-203ENST00000357376 PTPRTO14522 1441 aa8.4□□□□□ -1.07
RTN4-203ENST00000357376 SMARCA5O60264 1052 aaPredicted RBP8.39□□□□□ -1.07
RTN4-203ENST00000357376 SSFA2P28290 1259 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 ADCY10Q96PN6 1610 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 MIS18AQ9NYP9 233 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 CD109Q6YHK3 1445 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 ERVK-7P63135 1459 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 PRPF40AO75400 957 aaKnown RBP8.39□□□□□ -1.07
RTN4-203ENST00000357376 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 NUCB2P80303 420 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 TSPYL6Q8N831 410 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 ABCC11Q96J66 1382 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 NUCB1Q02818 461 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 MCM10Q7L590 875 aa8.39□□□□□ -1.07
RTN4-203ENST00000357376 A0A1W2PP64 1363 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 ESPNB1AK53 854 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 NEK4P51957 841 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 PREX2Q70Z35 1606 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 RABEP1Q15276 862 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 ZBTB40Q9NUA8 1239 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 TAOK2Q9UL54 1235 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 RTEL1-TNFRSF6BF6WH68 1400 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 EIF2S2P20042 333 aaKnown RBP8.38□□□□□ -1.07
RTN4-203ENST00000357376 BMP2KLQ5H9B9 411 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 VSIG10Q8N0Z9 540 aa8.38□□□□□ -1.07
RTN4-203ENST00000357376 NSD2O96028 1365 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 SMC5Q8IY18 1101 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 PHACTR3Q96KR7 559 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 USP19O94966 1318 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
RTN4-203ENST00000357376 CIZ1Q9ULV3 898 aaPredicted RBP8.37□□□□□ -1.07
RTN4-203ENST00000357376 CFAP65Q6ZU64 1925 aaKnown RBP8.36□□□□□ -1.07
RTN4-203ENST00000357376 RRAGDQ9NQL2 400 aaPredicted RBP8.36□□□□□ -1.07
RTN4-203ENST00000357376 SYNMO15061 1565 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 SYAP1Q96A49 352 aaPredicted RBP8.36□□□□□ -1.07
RTN4-203ENST00000357376 ZNF428Q96B54 188 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 C8orf58Q8NAV2 365 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 IFT57Q9NWB7 429 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 ASXL2Q76L83 1435 aa8.36□□□□□ -1.07
RTN4-203ENST00000357376 F6X3S4 739 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 ATP7AQ04656 1500 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 C16orf71Q8IYS4 520 aaPredicted RBP8.35□□□□□ -1.07
RTN4-203ENST00000357376 MPNDQ8N594 471 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 IL16Q14005 1332 aa8.35□□□□□ -1.07
RTN4-203ENST00000357376 GOLGA6L4A6NEF3 574 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms