RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 CT47A1Q5JQC4 288 aaPredicted RBP13.29□□□□□ -0.28
PHACTR3-201ENST00000355648 SLC26A8Q96RN1 970 aa13.29□□□□□ -0.28
PHACTR3-201ENST00000355648 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 ICE2Q659A1 982 aa13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
PHACTR3-201ENST00000355648 RAD50Q92878 1312 aa13.27□□□□□ -0.28
PHACTR3-201ENST00000355648 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.28
PHACTR3-201ENST00000355648 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.28
PHACTR3-201ENST00000355648 DHX16O60231 1041 aaKnown RBP13.27□□□□□ -0.29
PHACTR3-201ENST00000355648 RSPH14Q9UHP6 348 aa13.27□□□□□ -0.29
PHACTR3-201ENST00000355648 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 KIF1CO43896 1103 aaKnown RBP13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 MORC2Q9Y6X9 1032 aaPredicted RBP13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 KIF14Q15058 1648 aa13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
PHACTR3-201ENST00000355648 GOLGA6L22H0YM25 854 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 PLIN1O60240 522 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 SEC24BO95487 1268 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 GUCY2CP25092 1073 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 KIAA1107Q9UPP5 1409 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 GOLIM4O00461 696 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 SYCP1Q15431 976 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 DIAPH3Q9NSV4 1193 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 SH3BP1Q9Y3L3 701 aa13.25□□□□□ -0.29
PHACTR3-201ENST00000355648 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 DDIT3P35638 169 aa13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 TSC1Q92574 1164 aa13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
PHACTR3-201ENST00000355648 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 NBPF11Q86T75 865 aa13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 MLECQ14165 292 aa13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 GPBP1L1Q9HC44 474 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
PHACTR3-201ENST00000355648 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
PHACTR3-201ENST00000355648 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
PHACTR3-201ENST00000355648 IRF6O14896 467 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 CHAF1AQ13111 956 aaPredicted RBP13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 GOLGA6L6A8MZA4 724 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 KRT222Q8N1A0 295 aa13.21□□□□□ -0.29
PHACTR3-201ENST00000355648 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.3
PHACTR3-201ENST00000355648 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.3
PHACTR3-201ENST00000355648 HSCBQ8IWL3 235 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 ARHGAP31Q2M1Z3 1444 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 NOLC1Q14978 699 aaKnown RBP eCLIP13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 CLEC17AQ6ZS10 378 aa13.2□□□□□ -0.3
PHACTR3-201ENST00000355648 OS9Q13438 667 aaPredicted RBP13.19□□□□□ -0.3
PHACTR3-201ENST00000355648 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
PHACTR3-201ENST00000355648 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
PHACTR3-201ENST00000355648 SEMA3FQ13275 785 aa13.19□□□□□ -0.3
PHACTR3-201ENST00000355648 MED4Q9NPJ6 270 aa13.19□□□□□ -0.3
PHACTR3-201ENST00000355648 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 SSR1P43307 286 aaKnown RBP13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 DDX49Q9Y6V7 483 aaKnown RBP13.18□□□□□ -0.3
PHACTR3-201ENST00000355648 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 PSMD1Q99460 953 aa13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 CASQ1P31415 396 aa13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 HNRNPH2P55795 449 aaKnown RBP13.17□□□□□ -0.3
PHACTR3-201ENST00000355648 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms