RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 MED14O60244 1454 aa23.05■■□□□ 1.28
PDZD3-202ENST00000355547 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
PDZD3-202ENST00000355547 UPF2Q9HAU5 1272 aaKnown RBP23.05■■□□□ 1.28
PDZD3-202ENST00000355547 IL16Q14005 1332 aa23.05■■□□□ 1.28
PDZD3-202ENST00000355547 SLC52A1Q9NWF4 448 aa23.05■■□□□ 1.28
PDZD3-202ENST00000355547 TRIM35Q9UPQ4 493 aa23.05■■□□□ 1.28
PDZD3-202ENST00000355547 ARHGEF40Q8TER5 1519 aa23.04■■□□□ 1.28
PDZD3-202ENST00000355547 TSR2Q969E8 191 aaKnown RBP23.03■■□□□ 1.28
PDZD3-202ENST00000355547 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
PDZD3-202ENST00000355547 EXOSC9Q06265 439 aaKnown RBP23.02■■□□□ 1.28
PDZD3-202ENST00000355547 FTSJ3Q8IY81 847 aaKnown RBP23.02■■□□□ 1.28
PDZD3-202ENST00000355547 ANTXR1Q9H6X2 564 aa23.02■■□□□ 1.28
PDZD3-202ENST00000355547 BRPF3Q9ULD4 1205 aa23.02■■□□□ 1.28
PDZD3-202ENST00000355547 PTPRMP28827 1452 aa23.02■■□□□ 1.28
PDZD3-202ENST00000355547 HDAC1Q13547 482 aaPredicted RBP23.01■■□□□ 1.27
PDZD3-202ENST00000355547 FYB1O15117 783 aa23.01■■□□□ 1.27
PDZD3-202ENST00000355547 SAFB2Q14151 953 aaKnown RBP eCLIP23.01■■□□□ 1.27
PDZD3-202ENST00000355547 GGNBP2Q9H3C7 697 aa23.01■■□□□ 1.27
PDZD3-202ENST00000355547 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
PDZD3-202ENST00000355547 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
PDZD3-202ENST00000355547 TERF2IPQ9NYB0 399 aa23■■□□□ 1.27
PDZD3-202ENST00000355547 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
PDZD3-202ENST00000355547 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
PDZD3-202ENST00000355547 TRIM27P14373 513 aa22.99■■□□□ 1.27
PDZD3-202ENST00000355547 SSH1Q8WYL5 1049 aa22.99■■□□□ 1.27
PDZD3-202ENST00000355547 ANKRD26Q9UPS8 1709 aa22.99■■□□□ 1.27
PDZD3-202ENST00000355547 PNPLA6Q8IY17 1366 aa22.99■■□□□ 1.27
PDZD3-202ENST00000355547 DDX19BQ9UMR2 479 aa22.98■■□□□ 1.27
PDZD3-202ENST00000355547 ATF7IPQ6VMQ6 1270 aa22.98■■□□□ 1.27
PDZD3-202ENST00000355547 STK26Q9P289 416 aa22.98■■□□□ 1.27
PDZD3-202ENST00000355547 CLTCQ00610 1675 aaKnown RBP22.98■■□□□ 1.27
PDZD3-202ENST00000355547 TBC1D2Q9BYX2 928 aa22.97■■□□□ 1.27
PDZD3-202ENST00000355547 MLECQ14165 292 aa22.96■■□□□ 1.27
PDZD3-202ENST00000355547 RTN4Q9NQC3 1192 aaKnown RBP22.96■■□□□ 1.27
PDZD3-202ENST00000355547 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.27
PDZD3-202ENST00000355547 YTHDC2Q9H6S0 1430 aaKnown RBP22.95■■□□□ 1.26
PDZD3-202ENST00000355547 SMC5Q8IY18 1101 aa22.94■■□□□ 1.26
PDZD3-202ENST00000355547 SLKQ9H2G2 1235 aaPredicted RBP22.94■■□□□ 1.26
PDZD3-202ENST00000355547 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
PDZD3-202ENST00000355547 PRAM1Q96QH2 718 aa22.93■■□□□ 1.26
PDZD3-202ENST00000355547 DIAPH1O60610 1272 aaKnown RBP22.93■■□□□ 1.26
PDZD3-202ENST00000355547 RIPK4P57078 832 aa22.93■■□□□ 1.26
PDZD3-202ENST00000355547 NOB1Q9ULX3 412 aaKnown RBP22.93■■□□□ 1.26
PDZD3-202ENST00000355547 MINK1Q8N4C8 1332 aaPredicted RBP22.92■■□□□ 1.26
PDZD3-202ENST00000355547 ZBTB40Q9NUA8 1239 aa22.92■■□□□ 1.26
PDZD3-202ENST00000355547 REREQ9P2R6 1566 aa22.92■■□□□ 1.26
PDZD3-202ENST00000355547 ITPRIPQ8IWB1 547 aa22.91■■□□□ 1.26
PDZD3-202ENST00000355547 MYO5BQ9ULV0 1848 aa22.91■■□□□ 1.26
PDZD3-202ENST00000355547 CDC42BPGQ6DT37 1551 aa22.9■■□□□ 1.26
PDZD3-202ENST00000355547 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
PDZD3-202ENST00000355547 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
PDZD3-202ENST00000355547 POGKQ9P215 609 aa22.9■■□□□ 1.26
PDZD3-202ENST00000355547 KIF16BQ96L93 1317 aa22.9■■□□□ 1.26
PDZD3-202ENST00000355547 IPO8O15397 1037 aaKnown RBP22.89■■□□□ 1.26
PDZD3-202ENST00000355547 ALDH1L2Q3SY69 923 aa22.89■■□□□ 1.26
PDZD3-202ENST00000355547 FCHSD2O94868 740 aa22.89■■□□□ 1.25
PDZD3-202ENST00000355547 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
PDZD3-202ENST00000355547 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.88■■□□□ 1.25
PDZD3-202ENST00000355547 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
PDZD3-202ENST00000355547 C22orf23Q9BZE7 217 aa22.88■■□□□ 1.25
PDZD3-202ENST00000355547 AGLP35573 1532 aa22.88■■□□□ 1.25
PDZD3-202ENST00000355547 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
PDZD3-202ENST00000355547 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
PDZD3-202ENST00000355547 ZNF428Q96B54 188 aa22.85■■□□□ 1.25
PDZD3-202ENST00000355547 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
PDZD3-202ENST00000355547 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
PDZD3-202ENST00000355547 NUCB1Q02818 461 aa22.83■■□□□ 1.25
PDZD3-202ENST00000355547 FAM135BQ49AJ0 1406 aa22.83■■□□□ 1.25
PDZD3-202ENST00000355547 KIF20BQ96Q89 1820 aa22.83■■□□□ 1.24
PDZD3-202ENST00000355547 RSPH6AQ9H0K4 717 aa22.83■■□□□ 1.24
PDZD3-202ENST00000355547 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
PDZD3-202ENST00000355547 MFAP1P55081 439 aaKnown RBP22.82■■□□□ 1.24
PDZD3-202ENST00000355547 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
PDZD3-202ENST00000355547 POLKQ9UBT6 870 aa22.8■■□□□ 1.24
PDZD3-202ENST00000355547 DLC1Q96QB1 1528 aa22.79■■□□□ 1.24
PDZD3-202ENST00000355547 ATP7BP35670 1465 aa22.79■■□□□ 1.24
PDZD3-202ENST00000355547 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
PDZD3-202ENST00000355547 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
PDZD3-202ENST00000355547 CHMP5Q9NZZ3 219 aa22.78■■□□□ 1.24
PDZD3-202ENST00000355547 ARHGAP45Q92619 1136 aa22.77■■□□□ 1.24
PDZD3-202ENST00000355547 PIK3R4Q99570 1358 aa22.77■■□□□ 1.24
PDZD3-202ENST00000355547 MCM4P33991 863 aa22.77■■□□□ 1.23
PDZD3-202ENST00000355547 RBM25P49756 843 aaKnown RBP22.77■■□□□ 1.23
PDZD3-202ENST00000355547 NFE2L2Q16236 605 aa22.77■■□□□ 1.23
PDZD3-202ENST00000355547 CHD1LQ86WJ1 897 aa22.76■■□□□ 1.23
PDZD3-202ENST00000355547 L1TD1Q5T7N2 865 aaKnown RBP22.75■■□□□ 1.23
PDZD3-202ENST00000355547 VAMP4O75379 141 aa22.75■■□□□ 1.23
PDZD3-202ENST00000355547 CALD1Q05682 793 aaKnown RBP22.75■■□□□ 1.23
PDZD3-202ENST00000355547 ZBTB7BO15156 539 aaPredicted RBP22.74■■□□□ 1.23
PDZD3-202ENST00000355547 FAM43AQ8N2R8 423 aa22.74■■□□□ 1.23
PDZD3-202ENST00000355547 CHMP4BQ9H444 224 aaKnown RBP22.74■■□□□ 1.23
PDZD3-202ENST00000355547 MRPL50Q8N5N7 158 aaKnown RBP22.74■■□□□ 1.23
PDZD3-202ENST00000355547 PHACTR3Q96KR7 559 aa22.74■■□□□ 1.23
PDZD3-202ENST00000355547 PTCH1Q13635 1447 aa22.73■■□□□ 1.23
PDZD3-202ENST00000355547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDZD3-202ENST00000355547 SNX21Q969T3 373 aa22.73■■□□□ 1.23
PDZD3-202ENST00000355547 NCOA3Q9Y6Q9 1424 aa22.73■■□□□ 1.23
PDZD3-202ENST00000355547 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
PDZD3-202ENST00000355547 BMP2KLQ5H9B9 411 aa22.72■■□□□ 1.23
PDZD3-202ENST00000355547 SPRYD3Q8NCJ5 442 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms