RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FBXO31Q5XUX0 539 aaPredicted RBP15.05■□□□□ -0
COLCA1-201ENST00000355430 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
COLCA1-201ENST00000355430 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
COLCA1-201ENST00000355430 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
COLCA1-201ENST00000355430 FAM135AQ9P2D6 1515 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 NGLY1Q96IV0 654 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
COLCA1-201ENST00000355430 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 KCNH5Q8NCM2 988 aa15.04■□□□□ -0
COLCA1-201ENST00000355430 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 PRKAR2BP31323 418 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 NUCB2P80303 420 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 CABP1Q9NZU7 370 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 VPS37DQ86XT2 251 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 NUP153P49790 1475 aaKnown RBP15.03■□□□□ -0
COLCA1-201ENST00000355430 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 MSH6P52701 1360 aa15.03■□□□□ -0
COLCA1-201ENST00000355430 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
COLCA1-201ENST00000355430 PLCH2O75038 1416 aa15.02■□□□□ -0
COLCA1-201ENST00000355430 RARSP54136 660 aaKnown RBP15.02■□□□□ -0
COLCA1-201ENST00000355430 NECTIN2Q92692 538 aa15.02■□□□□ -0
COLCA1-201ENST00000355430 ITSN2Q9NZM3 1697 aa15.02■□□□□ -0
COLCA1-201ENST00000355430 GNL2Q13823 731 aaKnown RBP15.02□□□□□ -0.01
COLCA1-201ENST00000355430 CSPP1Q1MSJ5 1256 aa15.02□□□□□ -0.01
COLCA1-201ENST00000355430 AMOTL1Q8IY63 956 aa15.02□□□□□ -0.01
COLCA1-201ENST00000355430 DDX54Q8TDD1 881 aaKnown RBP15.02□□□□□ -0.01
COLCA1-201ENST00000355430 IGHDP01880 384 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 NASPP49321 788 aaPredicted RBP15.01□□□□□ -0.01
COLCA1-201ENST00000355430 FBXW7Q969H0 707 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 ADAMTS12P58397 1594 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 MCM4P33991 863 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 NRDCO43847 1150 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
COLCA1-201ENST00000355430 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
COLCA1-201ENST00000355430 ANO2Q9NQ90 1003 aa15□□□□□ -0.01
COLCA1-201ENST00000355430 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
COLCA1-201ENST00000355430 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
COLCA1-201ENST00000355430 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
COLCA1-201ENST00000355430 PZPP20742 1482 aa14.99□□□□□ -0.01
COLCA1-201ENST00000355430 CABP4P57796 275 aa14.99□□□□□ -0.01
COLCA1-201ENST00000355430 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
COLCA1-201ENST00000355430 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
COLCA1-201ENST00000355430 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
COLCA1-201ENST00000355430 IDI1Q13907 227 aa14.98□□□□□ -0.01
COLCA1-201ENST00000355430 CHD1LQ86WJ1 897 aa14.98□□□□□ -0.01
COLCA1-201ENST00000355430 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
COLCA1-201ENST00000355430 DNMT1P26358 1616 aaKnown RBP14.98□□□□□ -0.01
COLCA1-201ENST00000355430 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
COLCA1-201ENST00000355430 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
COLCA1-201ENST00000355430 TWISTNBQ3B726 338 aaPredicted RBP14.97□□□□□ -0.01
COLCA1-201ENST00000355430 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
COLCA1-201ENST00000355430 GRPEL1Q9HAV7 217 aa14.97□□□□□ -0.01
COLCA1-201ENST00000355430 ATP10BO94823 1461 aa14.97□□□□□ -0.01
COLCA1-201ENST00000355430 SCAF11Q99590 1463 aaKnown RBP14.97□□□□□ -0.01
COLCA1-201ENST00000355430 ZC3H6P61129 1189 aaKnown RBP14.97□□□□□ -0.01
COLCA1-201ENST00000355430 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
COLCA1-201ENST00000355430 HTATSF1O43719 755 aaKnown RBP14.97□□□□□ -0.01
COLCA1-201ENST00000355430 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
COLCA1-201ENST00000355430 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.96□□□□□ -0.01
COLCA1-201ENST00000355430 CLSTN1O94985 981 aa14.96□□□□□ -0.01
COLCA1-201ENST00000355430 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.02
COLCA1-201ENST00000355430 TBC1D2Q9BYX2 928 aa14.96□□□□□ -0.02
COLCA1-201ENST00000355430 GCC2Q8IWJ2 1684 aa14.96□□□□□ -0.02
COLCA1-201ENST00000355430 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
COLCA1-201ENST00000355430 FAM13BQ9NYF5 915 aa14.95□□□□□ -0.02
COLCA1-201ENST00000355430 CTDP1Q9Y5B0 961 aaPredicted RBP14.95□□□□□ -0.02
COLCA1-201ENST00000355430 K7ELQ4 463 aaPredicted RBP14.95□□□□□ -0.02
COLCA1-201ENST00000355430 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
COLCA1-201ENST00000355430 ADGRF5Q8IZF2 1346 aa14.95□□□□□ -0.02
COLCA1-201ENST00000355430 RABEP1Q15276 862 aa14.94□□□□□ -0.02
COLCA1-201ENST00000355430 KIAA0556O60303 1618 aa14.94□□□□□ -0.02
COLCA1-201ENST00000355430 UHRF1BP1LA0JNW5 1464 aa14.94□□□□□ -0.02
COLCA1-201ENST00000355430 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
COLCA1-201ENST00000355430 DIAPH3Q9NSV4 1193 aa14.94□□□□□ -0.02
COLCA1-201ENST00000355430 A2MP01023 1474 aa14.93□□□□□ -0.02
COLCA1-201ENST00000355430 ATP6V1DQ9Y5K8 247 aa14.93□□□□□ -0.02
COLCA1-201ENST00000355430 PRPF40AO75400 957 aaKnown RBP14.93□□□□□ -0.02
COLCA1-201ENST00000355430 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
COLCA1-201ENST00000355430 SSH1Q8WYL5 1049 aa14.93□□□□□ -0.02
COLCA1-201ENST00000355430 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
COLCA1-201ENST00000355430 AIMP1Q12904 312 aaKnown RBP14.92□□□□□ -0.02
COLCA1-201ENST00000355430 RNF214Q8ND24 703 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 SAMD9Q5K651 1589 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 FOXO3O43524 673 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
COLCA1-201ENST00000355430 R3HCC1Q9Y3T6 440 aaKnown RBP14.92□□□□□ -0.02
COLCA1-201ENST00000355430 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
COLCA1-201ENST00000355430 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
COLCA1-201ENST00000355430 CCDC173Q0VFZ6 552 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 NUP160Q12769 1436 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms