RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
GFRA1-201ENST00000355422 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
GFRA1-201ENST00000355422 MCM4P33991 863 aa18.37■□□□□ 0.53
GFRA1-201ENST00000355422 ARXQ96QS3 562 aa18.36■□□□□ 0.53
GFRA1-201ENST00000355422 ABCC3O15438 1527 aa18.36■□□□□ 0.53
GFRA1-201ENST00000355422 RIPK4P57078 832 aa18.36■□□□□ 0.53
GFRA1-201ENST00000355422 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
GFRA1-201ENST00000355422 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
GFRA1-201ENST00000355422 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
GFRA1-201ENST00000355422 FYB1O15117 783 aa18.34■□□□□ 0.53
GFRA1-201ENST00000355422 CHMP5Q9NZZ3 219 aa18.34■□□□□ 0.53
GFRA1-201ENST00000355422 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
GFRA1-201ENST00000355422 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
GFRA1-201ENST00000355422 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
GFRA1-201ENST00000355422 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.53
GFRA1-201ENST00000355422 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
GFRA1-201ENST00000355422 GZF1Q9H116 711 aaPredicted RBP18.33■□□□□ 0.52
GFRA1-201ENST00000355422 IL16Q14005 1332 aa18.33■□□□□ 0.52
GFRA1-201ENST00000355422 CAMSAP1Q5T5Y3 1602 aa18.33■□□□□ 0.52
GFRA1-201ENST00000355422 SIGLEC1Q9BZZ2 1709 aa18.31■□□□□ 0.52
GFRA1-201ENST00000355422 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
GFRA1-201ENST00000355422 IDI1Q13907 227 aa18.31■□□□□ 0.52
GFRA1-201ENST00000355422 MINK1Q8N4C8 1332 aaPredicted RBP18.31■□□□□ 0.52
GFRA1-201ENST00000355422 GOLGA6L3A6NEY3 463 aa18.31■□□□□ 0.52
GFRA1-201ENST00000355422 XRCC6P12956 609 aaKnown RBP eCLIP18.31■□□□□ 0.52
GFRA1-201ENST00000355422 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
GFRA1-201ENST00000355422 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
GFRA1-201ENST00000355422 HSCBQ8IWL3 235 aa18.3■□□□□ 0.52
GFRA1-201ENST00000355422 RRAGDQ9NQL2 400 aaPredicted RBP18.3■□□□□ 0.52
GFRA1-201ENST00000355422 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
GFRA1-201ENST00000355422 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
GFRA1-201ENST00000355422 TERF2IPQ9NYB0 399 aa18.3■□□□□ 0.52
GFRA1-201ENST00000355422 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
GFRA1-201ENST00000355422 TRAK2O60296 914 aa18.29■□□□□ 0.52
GFRA1-201ENST00000355422 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
GFRA1-201ENST00000355422 NUCB1Q02818 461 aa18.29■□□□□ 0.52
GFRA1-201ENST00000355422 PIK3C2BO00750 1634 aa18.28■□□□□ 0.52
GFRA1-201ENST00000355422 RAPGEF3O95398 923 aa18.27■□□□□ 0.52
GFRA1-201ENST00000355422 PRAM1Q96QH2 718 aa18.27■□□□□ 0.52
GFRA1-201ENST00000355422 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
GFRA1-201ENST00000355422 RSPH6AQ9H0K4 717 aa18.27■□□□□ 0.51
GFRA1-201ENST00000355422 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
GFRA1-201ENST00000355422 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
GFRA1-201ENST00000355422 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
GFRA1-201ENST00000355422 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
GFRA1-201ENST00000355422 PANK2Q9BZ23 570 aa18.26■□□□□ 0.51
GFRA1-201ENST00000355422 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
GFRA1-201ENST00000355422 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
GFRA1-201ENST00000355422 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
GFRA1-201ENST00000355422 FBLN1P23142 703 aa18.24■□□□□ 0.51
GFRA1-201ENST00000355422 MED14O60244 1454 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 PTPRMP28827 1452 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
GFRA1-201ENST00000355422 FCHSD2O94868 740 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 PRKAR2BP31323 418 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
GFRA1-201ENST00000355422 DDIT3P35638 169 aa18.22■□□□□ 0.51
GFRA1-201ENST00000355422 CFAP74Q9C0B2 1584 aa18.22■□□□□ 0.51
GFRA1-201ENST00000355422 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
GFRA1-201ENST00000355422 SNX21Q969T3 373 aa18.22■□□□□ 0.51
GFRA1-201ENST00000355422 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
GFRA1-201ENST00000355422 CDK19Q9BWU1 502 aa18.21■□□□□ 0.51
GFRA1-201ENST00000355422 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
GFRA1-201ENST00000355422 SLC52A1Q9NWF4 448 aa18.21■□□□□ 0.51
GFRA1-201ENST00000355422 DDX11L8A8MPP1 907 aa18.21■□□□□ 0.51
GFRA1-201ENST00000355422 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
GFRA1-201ENST00000355422 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
GFRA1-201ENST00000355422 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
GFRA1-201ENST00000355422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
GFRA1-201ENST00000355422 ANKRD26Q9UPS8 1709 aa18.2■□□□□ 0.5
GFRA1-201ENST00000355422 YTHDC2Q9H6S0 1430 aaKnown RBP18.2■□□□□ 0.5
GFRA1-201ENST00000355422 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
GFRA1-201ENST00000355422 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
GFRA1-201ENST00000355422 PPIP5K1Q6PFW1 1433 aa18.19■□□□□ 0.5
GFRA1-201ENST00000355422 VAMP4O75379 141 aa18.19■□□□□ 0.5
GFRA1-201ENST00000355422 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
GFRA1-201ENST00000355422 LRRC7Q96NW7 1537 aa18.19■□□□□ 0.5
GFRA1-201ENST00000355422 HSP90AB1P08238 724 aaKnown RBP18.18■□□□□ 0.5
GFRA1-201ENST00000355422 HMOX1P09601 288 aa18.18■□□□□ 0.5
GFRA1-201ENST00000355422 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
GFRA1-201ENST00000355422 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
GFRA1-201ENST00000355422 TNPO1Q92973 898 aaKnown RBP18.18■□□□□ 0.5
GFRA1-201ENST00000355422 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
GFRA1-201ENST00000355422 KIF2CQ99661 725 aa18.18■□□□□ 0.5
GFRA1-201ENST00000355422 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
GFRA1-201ENST00000355422 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
GFRA1-201ENST00000355422 MRE11P49959 708 aa18.17■□□□□ 0.5
GFRA1-201ENST00000355422 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
GFRA1-201ENST00000355422 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
GFRA1-201ENST00000355422 CD2BP2O95400 341 aaKnown RBP18.16■□□□□ 0.5
GFRA1-201ENST00000355422 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
GFRA1-201ENST00000355422 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
GFRA1-201ENST00000355422 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
GFRA1-201ENST00000355422 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
GFRA1-201ENST00000355422 DIP2CQ9Y2E4 1556 aa18.15■□□□□ 0.5
GFRA1-201ENST00000355422 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.5
GFRA1-201ENST00000355422 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.5
GFRA1-201ENST00000355422 TBC1D9Q6ZT07 1266 aa18.14■□□□□ 0.49
GFRA1-201ENST00000355422 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms