RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 NME9Q86XW9 330 aa30.32■■■□□ 2.44
SCAMP3-202ENST00000355379 NGEFQ8N5V2 710 aa30.32■■■□□ 2.44
SCAMP3-202ENST00000355379 TTC21BQ7Z4L5 1316 aa30.31■■■□□ 2.44
SCAMP3-202ENST00000355379 AATKQ6ZMQ8 1374 aa30.31■■■□□ 2.44
SCAMP3-202ENST00000355379 PNPLA6Q8IY17 1366 aa30.3■■■□□ 2.44
SCAMP3-202ENST00000355379 NEFLP07196 543 aa30.3■■■□□ 2.44
SCAMP3-202ENST00000355379 COG3Q96JB2 828 aa30.29■■■□□ 2.44
SCAMP3-202ENST00000355379 SUPT16HQ9Y5B9 1047 aaKnown RBP30.29■■■□□ 2.44
SCAMP3-202ENST00000355379 SENP3-EIF4A1A0A087X0R7 540 aa30.28■■■□□ 2.44
SCAMP3-202ENST00000355379 TTC21AQ8NDW8 1320 aa30.27■■■□□ 2.44
SCAMP3-202ENST00000355379 SALL2Q9Y467 1007 aaPredicted RBP30.26■■■□□ 2.43
SCAMP3-202ENST00000355379 OVOS2A0A0J9YW53 1432 aa30.24■■■□□ 2.43
SCAMP3-202ENST00000355379 OVOS2Q6IE36 1432 aa30.24■■■□□ 2.43
SCAMP3-202ENST00000355379 POLKQ9UBT6 870 aa30.24■■■□□ 2.43
SCAMP3-202ENST00000355379 CCDC146Q8IYE0 955 aa30.23■■■□□ 2.43
SCAMP3-202ENST00000355379 NGDNQ8NEJ9 315 aaKnown RBP30.23■■■□□ 2.43
SCAMP3-202ENST00000355379 ZNF521Q96K83 1311 aa30.23■■■□□ 2.43
SCAMP3-202ENST00000355379 PMFBP1Q8TBY8 1022 aa30.22■■■□□ 2.43
SCAMP3-202ENST00000355379 ZRANB1Q9UGI0 708 aa30.22■■■□□ 2.43
SCAMP3-202ENST00000355379 LMTK3Q96Q04 1460 aa30.22■■■□□ 2.43
SCAMP3-202ENST00000355379 RUNDC1Q96C34 613 aa30.22■■■□□ 2.43
SCAMP3-202ENST00000355379 CDK12Q9NYV4 1490 aaPredicted RBP30.21■■■□□ 2.43
SCAMP3-202ENST00000355379 APAF1O14727 1248 aa30.2■■■□□ 2.42
SCAMP3-202ENST00000355379 FKBP8Q14318 412 aa30.2■■■□□ 2.42
SCAMP3-202ENST00000355379 USP54Q70EL1 1684 aa30.2■■■□□ 2.42
SCAMP3-202ENST00000355379 IQSEC2Q5JU85 1478 aa30.19■■■□□ 2.42
SCAMP3-202ENST00000355379 USP31Q70CQ4 1352 aa30.19■■■□□ 2.42
SCAMP3-202ENST00000355379 DIAPH1O60610 1272 aaKnown RBP30.18■■■□□ 2.42
SCAMP3-202ENST00000355379 NCBP3Q53F19 620 aaKnown RBP30.18■■■□□ 2.42
SCAMP3-202ENST00000355379 STRCP1A6NGW2 1772 aa30.18■■■□□ 2.42
SCAMP3-202ENST00000355379 PROSER2Q86WR7 435 aaPredicted RBP30.17■■■□□ 2.42
SCAMP3-202ENST00000355379 NCOA3Q9Y6Q9 1424 aa30.16■■■□□ 2.42
SCAMP3-202ENST00000355379 STRCQ7RTU9 1775 aa30.16■■■□□ 2.42
SCAMP3-202ENST00000355379 PIK3C2AO00443 1686 aa30.16■■■□□ 2.42
SCAMP3-202ENST00000355379 U2AF1L5P0DN76 240 aaPredicted RBP30.16■■■□□ 2.42
SCAMP3-202ENST00000355379 U2AF1Q01081 240 aaKnown RBP eCLIP30.16■■■□□ 2.42
SCAMP3-202ENST00000355379 PHF8Q9UPP1 1060 aa30.15■■■□□ 2.42
SCAMP3-202ENST00000355379 LRRC7Q96NW7 1537 aa30.14■■■□□ 2.42
SCAMP3-202ENST00000355379 HSPA2P54652 639 aa30.14■■■□□ 2.42
SCAMP3-202ENST00000355379 RNF123Q5XPI4 1314 aa30.14■■■□□ 2.42
SCAMP3-202ENST00000355379 RBM33Q96EV2 1170 aaKnown RBP30.13■■■□□ 2.41
SCAMP3-202ENST00000355379 CDCA7LQ96GN5 454 aa30.13■■■□□ 2.41
SCAMP3-202ENST00000355379 C14orf37Q86TY3 774 aa30.12■■■□□ 2.41
SCAMP3-202ENST00000355379 GOLGA2Q08379 1002 aa30.12■■■□□ 2.41
SCAMP3-202ENST00000355379 PNNQ9H307 717 aaKnown RBP30.12■■■□□ 2.41
SCAMP3-202ENST00000355379 FBLN1P23142 703 aa30.1■■■□□ 2.41
SCAMP3-202ENST00000355379 ERICH6BQ5W0A0 696 aa30.1■■■□□ 2.41
SCAMP3-202ENST00000355379 EMILIN1Q9Y6C2 1016 aa30.1■■■□□ 2.41
SCAMP3-202ENST00000355379 U2SURPO15042 1029 aaKnown RBP30.09■■■□□ 2.41
SCAMP3-202ENST00000355379 MARF1Q9Y4F3 1742 aaKnown RBP30.09■■■□□ 2.41
SCAMP3-202ENST00000355379 TCP11L2Q8N4U5 519 aa30.08■■■□□ 2.41
SCAMP3-202ENST00000355379 CCDC27Q2M243 656 aa30.07■■■□□ 2.4
SCAMP3-202ENST00000355379 C19orf44Q9H6X5 657 aa30.07■■■□□ 2.4
SCAMP3-202ENST00000355379 KIF1AQ12756 1690 aa30.07■■■□□ 2.4
SCAMP3-202ENST00000355379 PLEKHF1Q96S99 279 aa30.06■■■□□ 2.4
SCAMP3-202ENST00000355379 PHF23Q9BUL5 403 aaPredicted RBP30.06■■■□□ 2.4
SCAMP3-202ENST00000355379 DCCP43146 1447 aa30.06■■■□□ 2.4
SCAMP3-202ENST00000355379 PPM1GO15355 546 aaPredicted RBP30.06■■■□□ 2.4
SCAMP3-202ENST00000355379 SLFN5Q08AF3 891 aa30.05■■■□□ 2.4
SCAMP3-202ENST00000355379 TRMT2AQ8IZ69 625 aaKnown RBP30.05■■■□□ 2.4
SCAMP3-202ENST00000355379 IL13P35225 146 aa30.04■■■□□ 2.4
SCAMP3-202ENST00000355379 FCHSD2O94868 740 aa30.03■■■□□ 2.4
SCAMP3-202ENST00000355379 RRS1Q15050 365 aaKnown RBP30.03■■■□□ 2.4
SCAMP3-202ENST00000355379 ESCO1Q5FWF5 840 aa30.03■■■□□ 2.4
SCAMP3-202ENST00000355379 PEAK1Q9H792 1746 aa30.03■■■□□ 2.4
SCAMP3-202ENST00000355379 DUSP27Q5VZP5 1158 aa30.02■■■□□ 2.4
SCAMP3-202ENST00000355379 WWC1Q8IX03 1113 aa30.02■■■□□ 2.4
SCAMP3-202ENST00000355379 RCAN3Q9UKA8 241 aa30.02■■■□□ 2.4
SCAMP3-202ENST00000355379 TMEM94Q12767 1356 aa30.02■■■□□ 2.4
SCAMP3-202ENST00000355379 E9PSI1 815 aa30.01■■■□□ 2.39
SCAMP3-202ENST00000355379 C1orf167Q5SNV9 1468 aa30■■■□□ 2.39
SCAMP3-202ENST00000355379 WDR63Q8IWG1 891 aa29.99■■■□□ 2.39
SCAMP3-202ENST00000355379 MAPK8IP3Q9UPT6 1336 aa29.98■■■□□ 2.39
SCAMP3-202ENST00000355379 XIRP1Q702N8 1843 aaKnown RBP29.98■■■□□ 2.39
SCAMP3-202ENST00000355379 NLRP6P59044 892 aa29.97■■■□□ 2.39
SCAMP3-202ENST00000355379 RSPH6AQ9H0K4 717 aa29.97■■■□□ 2.39
SCAMP3-202ENST00000355379 PSME1Q06323 249 aa29.96■■■□□ 2.39
SCAMP3-202ENST00000355379 ABTB2Q8N961 1025 aa29.96■■■□□ 2.39
SCAMP3-202ENST00000355379 KIF24Q5T7B8 1368 aa29.96■■■□□ 2.39
SCAMP3-202ENST00000355379 SBNO1A3KN83 1393 aa29.95■■■□□ 2.38
SCAMP3-202ENST00000355379 MST1RQ04912 1400 aa29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 RGPD1P0DJD0 1748 aa29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 TRPM3Q9HCF6 1732 aaPredicted RBP29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 ATF3P18847 181 aa29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 TMPOP42166 694 aaKnown RBP29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 ORAI2Q96SN7 254 aa29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 RRP7AQ9Y3A4 280 aaKnown RBP29.94■■■□□ 2.38
SCAMP3-202ENST00000355379 PAK3O75914 559 aaPredicted RBP29.92■■■□□ 2.38
SCAMP3-202ENST00000355379 MAP3K19Q56UN5 1328 aa29.92■■■□□ 2.38
SCAMP3-202ENST00000355379 IRX6P78412 446 aaPredicted RBP29.91■■■□□ 2.38
SCAMP3-202ENST00000355379 NEUROD2Q15784 382 aa29.91■■■□□ 2.38
SCAMP3-202ENST00000355379 SPINK5Q9NQ38 1064 aaPredicted RBP29.91■■■□□ 2.38
SCAMP3-202ENST00000355379 FLT4P35916 1363 aa29.91■■■□□ 2.38
SCAMP3-202ENST00000355379 NEFMP07197 916 aa29.91■■■□□ 2.38
SCAMP3-202ENST00000355379 RRP1P56182 461 aaKnown RBP29.9■■■□□ 2.38
SCAMP3-202ENST00000355379 EIF4A2Q14240 407 aaKnown RBP29.9■■■□□ 2.38
SCAMP3-202ENST00000355379 PRKAR2BP31323 418 aa29.89■■■□□ 2.38
SCAMP3-202ENST00000355379 CADPS2Q86UW7 1296 aa29.89■■■□□ 2.38
SCAMP3-202ENST00000355379 DMRT2Q9Y5R5 561 aa29.89■■■□□ 2.38
SCAMP3-202ENST00000355379 MSH6P52701 1360 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms