RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
EBF3-201ENST00000355311 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
EBF3-201ENST00000355311 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
EBF3-201ENST00000355311 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
EBF3-201ENST00000355311 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
EBF3-201ENST00000355311 NEO1Q92859 1461 aa17.53■□□□□ 0.4
EBF3-201ENST00000355311 PKNOX2Q96KN3 472 aa17.52■□□□□ 0.4
EBF3-201ENST00000355311 GZF1Q9H116 711 aaPredicted RBP17.52■□□□□ 0.4
EBF3-201ENST00000355311 MYOM2P54296 1465 aa17.52■□□□□ 0.4
EBF3-201ENST00000355311 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.39
EBF3-201ENST00000355311 ANKRD36BQ8N2N9 1353 aa17.51■□□□□ 0.39
EBF3-201ENST00000355311 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
EBF3-201ENST00000355311 RRAGDQ9NQL2 400 aaPredicted RBP17.51■□□□□ 0.39
EBF3-201ENST00000355311 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
EBF3-201ENST00000355311 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
EBF3-201ENST00000355311 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
EBF3-201ENST00000355311 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
EBF3-201ENST00000355311 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
EBF3-201ENST00000355311 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
EBF3-201ENST00000355311 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
EBF3-201ENST00000355311 TULP4Q9NRJ4 1543 aa17.49■□□□□ 0.39
EBF3-201ENST00000355311 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
EBF3-201ENST00000355311 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
EBF3-201ENST00000355311 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 DIP2BQ9P265 1576 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 ABCC3O15438 1527 aa17.48■□□□□ 0.39
EBF3-201ENST00000355311 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
EBF3-201ENST00000355311 ATF7IPQ6VMQ6 1270 aa17.47■□□□□ 0.39
EBF3-201ENST00000355311 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
EBF3-201ENST00000355311 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
EBF3-201ENST00000355311 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
EBF3-201ENST00000355311 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
EBF3-201ENST00000355311 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
EBF3-201ENST00000355311 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
EBF3-201ENST00000355311 RICTORQ6R327 1708 aa17.45■□□□□ 0.38
EBF3-201ENST00000355311 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
EBF3-201ENST00000355311 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
EBF3-201ENST00000355311 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
EBF3-201ENST00000355311 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
EBF3-201ENST00000355311 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
EBF3-201ENST00000355311 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
EBF3-201ENST00000355311 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
EBF3-201ENST00000355311 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
EBF3-201ENST00000355311 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
EBF3-201ENST00000355311 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
EBF3-201ENST00000355311 MCM10Q7L590 875 aa17.42■□□□□ 0.38
EBF3-201ENST00000355311 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
EBF3-201ENST00000355311 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
EBF3-201ENST00000355311 CAMSAP1Q5T5Y3 1602 aa17.41■□□□□ 0.38
EBF3-201ENST00000355311 TSPOAP1O95153 1857 aa17.41■□□□□ 0.38
EBF3-201ENST00000355311 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
EBF3-201ENST00000355311 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
EBF3-201ENST00000355311 NAP1L5Q96NT1 182 aaPredicted RBP17.4■□□□□ 0.38
EBF3-201ENST00000355311 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
EBF3-201ENST00000355311 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
EBF3-201ENST00000355311 SHPRHQ149N8 1683 aa17.39■□□□□ 0.37
EBF3-201ENST00000355311 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
EBF3-201ENST00000355311 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
EBF3-201ENST00000355311 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
EBF3-201ENST00000355311 MYO5BQ9ULV0 1848 aa17.38■□□□□ 0.37
EBF3-201ENST00000355311 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
EBF3-201ENST00000355311 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
EBF3-201ENST00000355311 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
EBF3-201ENST00000355311 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
EBF3-201ENST00000355311 PPLO60437 1756 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 FOXO3O43524 673 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 REREQ9P2R6 1566 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 METP08581 1390 aa17.37■□□□□ 0.37
EBF3-201ENST00000355311 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
EBF3-201ENST00000355311 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
EBF3-201ENST00000355311 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 BECN1Q14457 450 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 COG3Q96JB2 828 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 PANK2Q9BZ23 570 aa17.36■□□□□ 0.37
EBF3-201ENST00000355311 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
EBF3-201ENST00000355311 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
EBF3-201ENST00000355311 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
EBF3-201ENST00000355311 VAMP4O75379 141 aa17.35■□□□□ 0.37
EBF3-201ENST00000355311 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
EBF3-201ENST00000355311 TBC1D32Q96NH3 1257 aa17.35■□□□□ 0.37
EBF3-201ENST00000355311 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
EBF3-201ENST00000355311 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
EBF3-201ENST00000355311 FCHSD2O94868 740 aa17.34■□□□□ 0.37
EBF3-201ENST00000355311 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
EBF3-201ENST00000355311 SMARCA5O60264 1052 aaPredicted RBP17.33■□□□□ 0.37
EBF3-201ENST00000355311 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.36
EBF3-201ENST00000355311 ZC3H13Q5T200 1668 aaKnown RBP17.33■□□□□ 0.36
EBF3-201ENST00000355311 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
EBF3-201ENST00000355311 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
EBF3-201ENST00000355311 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
EBF3-201ENST00000355311 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
EBF3-201ENST00000355311 PTPRMP28827 1452 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms