RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MAP2P11137 1827 aaKnown RBP22.9■■□□□ 1.26
VPS13B-201ENST00000355155 CDK12Q9NYV4 1490 aaPredicted RBP22.9■■□□□ 1.26
VPS13B-201ENST00000355155 OVOS2A0A0J9YW53 1432 aa22.9■■□□□ 1.26
VPS13B-201ENST00000355155 OVOS2Q6IE36 1432 aa22.9■■□□□ 1.26
VPS13B-201ENST00000355155 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
VPS13B-201ENST00000355155 KCNA6P17658 529 aa22.88■■□□□ 1.25
VPS13B-201ENST00000355155 GGNBP2Q9H3C7 697 aa22.88■■□□□ 1.25
VPS13B-201ENST00000355155 USP31Q70CQ4 1352 aa22.87■■□□□ 1.25
VPS13B-201ENST00000355155 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
VPS13B-201ENST00000355155 MARF1Q9Y4F3 1742 aaKnown RBP22.86■■□□□ 1.25
VPS13B-201ENST00000355155 NEFLP07196 543 aa22.86■■□□□ 1.25
VPS13B-201ENST00000355155 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
VPS13B-201ENST00000355155 TTC21AQ8NDW8 1320 aa22.85■■□□□ 1.25
VPS13B-201ENST00000355155 TRMT2AQ8IZ69 625 aaKnown RBP22.85■■□□□ 1.25
VPS13B-201ENST00000355155 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
VPS13B-201ENST00000355155 ACEP12821 1306 aa22.83■■□□□ 1.25
VPS13B-201ENST00000355155 CCDC27Q2M243 656 aa22.83■■□□□ 1.24
VPS13B-201ENST00000355155 TTC21BQ7Z4L5 1316 aa22.83■■□□□ 1.24
VPS13B-201ENST00000355155 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
VPS13B-201ENST00000355155 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
VPS13B-201ENST00000355155 FKBP8Q14318 412 aa22.81■■□□□ 1.24
VPS13B-201ENST00000355155 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
VPS13B-201ENST00000355155 POLKQ9UBT6 870 aa22.79■■□□□ 1.24
VPS13B-201ENST00000355155 RGPD1P0DJD0 1748 aa22.78■■□□□ 1.24
VPS13B-201ENST00000355155 KIF1AQ12756 1690 aa22.77■■□□□ 1.24
VPS13B-201ENST00000355155 STRCP1A6NGW2 1772 aa22.77■■□□□ 1.24
VPS13B-201ENST00000355155 NME9Q86XW9 330 aa22.77■■□□□ 1.23
VPS13B-201ENST00000355155 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.23
VPS13B-201ENST00000355155 TNNT2P45379 298 aaPredicted RBP22.75■■□□□ 1.23
VPS13B-201ENST00000355155 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
VPS13B-201ENST00000355155 COG3Q96JB2 828 aa22.75■■□□□ 1.23
VPS13B-201ENST00000355155 PEAK1Q9H792 1746 aa22.75■■□□□ 1.23
VPS13B-201ENST00000355155 DCCP43146 1447 aa22.74■■□□□ 1.23
VPS13B-201ENST00000355155 GOLGA2Q08379 1002 aa22.74■■□□□ 1.23
VPS13B-201ENST00000355155 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
VPS13B-201ENST00000355155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
VPS13B-201ENST00000355155 APAF1O14727 1248 aa22.74■■□□□ 1.23
VPS13B-201ENST00000355155 MST1RQ04912 1400 aa22.74■■□□□ 1.23
VPS13B-201ENST00000355155 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
VPS13B-201ENST00000355155 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
VPS13B-201ENST00000355155 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
VPS13B-201ENST00000355155 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
VPS13B-201ENST00000355155 DIAPH1O60610 1272 aaKnown RBP22.72■■□□□ 1.23
VPS13B-201ENST00000355155 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
VPS13B-201ENST00000355155 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
VPS13B-201ENST00000355155 WDR63Q8IWG1 891 aa22.71■■□□□ 1.23
VPS13B-201ENST00000355155 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
VPS13B-201ENST00000355155 TRPM3Q9HCF6 1732 aaPredicted RBP22.69■■□□□ 1.22
VPS13B-201ENST00000355155 E9PSI1 815 aa22.69■■□□□ 1.22
VPS13B-201ENST00000355155 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
VPS13B-201ENST00000355155 FCHSD2O94868 740 aa22.68■■□□□ 1.22
VPS13B-201ENST00000355155 IL13P35225 146 aa22.68■■□□□ 1.22
VPS13B-201ENST00000355155 WWC1Q8IX03 1113 aa22.68■■□□□ 1.22
VPS13B-201ENST00000355155 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
VPS13B-201ENST00000355155 TCP11L2Q8N4U5 519 aa22.67■■□□□ 1.22
VPS13B-201ENST00000355155 ZRANB1Q9UGI0 708 aa22.67■■□□□ 1.22
VPS13B-201ENST00000355155 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
VPS13B-201ENST00000355155 RRP1P56182 461 aaKnown RBP22.65■■□□□ 1.22
VPS13B-201ENST00000355155 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.226e-6■■■■□ 22.1
VPS13B-201ENST00000355155 XIRP1Q702N8 1843 aaKnown RBP22.65■■□□□ 1.22
VPS13B-201ENST00000355155 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
VPS13B-201ENST00000355155 IL16Q14005 1332 aa22.63■■□□□ 1.21
VPS13B-201ENST00000355155 PPP4R2Q9NY27 417 aa22.63■■□□□ 1.21
VPS13B-201ENST00000355155 SLIT3O75094 1523 aa22.62■■□□□ 1.21
VPS13B-201ENST00000355155 PHF8Q9UPP1 1060 aa22.62■■□□□ 1.21
VPS13B-201ENST00000355155 SALL2Q9Y467 1007 aaPredicted RBP22.62■■□□□ 1.21
VPS13B-201ENST00000355155 EMILIN1Q9Y6C2 1016 aa22.62■■□□□ 1.21
VPS13B-201ENST00000355155 NFAT5O94916 1531 aa22.61■■□□□ 1.21
VPS13B-201ENST00000355155 SBNO1A3KN83 1393 aa22.61■■□□□ 1.21
VPS13B-201ENST00000355155 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
VPS13B-201ENST00000355155 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
VPS13B-201ENST00000355155 ALS2Q96Q42 1657 aa22.59■■□□□ 1.21
VPS13B-201ENST00000355155 PMFBP1Q8TBY8 1022 aa22.59■■□□□ 1.21
VPS13B-201ENST00000355155 RTL1A6NKG5 1358 aa22.59■■□□□ 1.21
VPS13B-201ENST00000355155 TMPOP42166 694 aaKnown RBP22.58■■□□□ 1.21
VPS13B-201ENST00000355155 SPINK5Q9NQ38 1064 aaPredicted RBP22.58■■□□□ 1.21
VPS13B-201ENST00000355155 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
VPS13B-201ENST00000355155 C19orf44Q9H6X5 657 aa22.57■■□□□ 1.2
VPS13B-201ENST00000355155 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
VPS13B-201ENST00000355155 NUTM2FA1L443 756 aa22.56■■□□□ 1.2
VPS13B-201ENST00000355155 FLT4P35916 1363 aa22.56■■□□□ 1.2
VPS13B-201ENST00000355155 DLG5Q8TDM6 1919 aa22.56■■□□□ 1.2
VPS13B-201ENST00000355155 DMRT2Q9Y5R5 561 aa22.56■■□□□ 1.2
VPS13B-201ENST00000355155 LTN1O94822 1766 aa22.55■■□□□ 1.2
VPS13B-201ENST00000355155 TRIM35Q9UPQ4 493 aa22.55■■□□□ 1.2
VPS13B-201ENST00000355155 U2SURPO15042 1029 aaKnown RBP22.54■■□□□ 1.2
VPS13B-201ENST00000355155 CT47B1P0C2W7 299 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-201ENST00000355155 FBLN1P23142 703 aa22.53■■□□□ 1.2
VPS13B-201ENST00000355155 MAPK8IP3Q9UPT6 1336 aa22.53■■□□□ 1.2
VPS13B-201ENST00000355155 PROSER2Q86WR7 435 aaPredicted RBP22.53■■□□□ 1.2
VPS13B-201ENST00000355155 KDRP35968 1356 aa22.52■■□□□ 1.2
VPS13B-201ENST00000355155 RRS1Q15050 365 aaKnown RBP22.52■■□□□ 1.2
VPS13B-201ENST00000355155 MAP3K19Q56UN5 1328 aa22.51■■□□□ 1.19
VPS13B-201ENST00000355155 EIF4A2Q14240 407 aaKnown RBP22.51■■□□□ 1.19
VPS13B-201ENST00000355155 CAMTA1Q9Y6Y1 1673 aa22.51■■□□□ 1.19
VPS13B-201ENST00000355155 TMEM94Q12767 1356 aa22.51■■□□□ 1.19
VPS13B-201ENST00000355155 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
VPS13B-201ENST00000355155 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
VPS13B-201ENST00000355155 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
VPS13B-201ENST00000355155 CRYBG1Q9Y4K1 1723 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms