RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MYO3AQ8NEV4 1616 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 CGNL1Q0VF96 1302 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 RLBP1P12271 317 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
SMG6-202ENST00000354901 ESPNB1AK53 854 aa11.87□□□□□ -0.51
SMG6-202ENST00000354901 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
SMG6-202ENST00000354901 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
SMG6-202ENST00000354901 SEC24BO95487 1268 aa11.86□□□□□ -0.51
SMG6-202ENST00000354901 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
SMG6-202ENST00000354901 KIAA1211Q6ZU35 1233 aa11.86□□□□□ -0.51
SMG6-202ENST00000354901 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
SMG6-202ENST00000354901 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
SMG6-202ENST00000354901 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
SMG6-202ENST00000354901 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
SMG6-202ENST00000354901 BECN1Q14457 450 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 IDI1Q13907 227 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
SMG6-202ENST00000354901 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
SMG6-202ENST00000354901 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
SMG6-202ENST00000354901 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
SMG6-202ENST00000354901 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
SMG6-202ENST00000354901 FBLN1P23142 703 aa11.83□□□□□ -0.52
SMG6-202ENST00000354901 FTSJ3Q8IY81 847 aaKnown RBP11.82□□□□□ -0.52
SMG6-202ENST00000354901 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
SMG6-202ENST00000354901 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
SMG6-202ENST00000354901 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
SMG6-202ENST00000354901 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
SMG6-202ENST00000354901 SMC4Q9NTJ3 1288 aa11.8□□□□□ -0.52
SMG6-202ENST00000354901 PRDM4Q9UKN5 801 aa11.8□□□□□ -0.52
SMG6-202ENST00000354901 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
SMG6-202ENST00000354901 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
SMG6-202ENST00000354901 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
SMG6-202ENST00000354901 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
SMG6-202ENST00000354901 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
SMG6-202ENST00000354901 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
SMG6-202ENST00000354901 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
SMG6-202ENST00000354901 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
SMG6-202ENST00000354901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMG6-202ENST00000354901 MAPK8IP3Q9UPT6 1336 aa11.79□□□□□ -0.52
SMG6-202ENST00000354901 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
SMG6-202ENST00000354901 TPM2P07951 284 aa11.78□□□□□ -0.52
SMG6-202ENST00000354901 PLPPR3Q6T4P5 718 aa11.78□□□□□ -0.52
SMG6-202ENST00000354901 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
SMG6-202ENST00000354901 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
SMG6-202ENST00000354901 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
SMG6-202ENST00000354901 A0A1W2PP64 1363 aa11.78□□□□□ -0.52
SMG6-202ENST00000354901 TRAK2O60296 914 aa11.77□□□□□ -0.52
SMG6-202ENST00000354901 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.52
SMG6-202ENST00000354901 USP19O94966 1318 aa11.77□□□□□ -0.53
SMG6-202ENST00000354901 ZKSCAN2Q63HK3 967 aa11.77□□□□□ -0.53
SMG6-202ENST00000354901 GRPEL1Q9HAV7 217 aa11.77□□□□□ -0.53
SMG6-202ENST00000354901 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
SMG6-202ENST00000354901 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
SMG6-202ENST00000354901 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
SMG6-202ENST00000354901 RIPK4P57078 832 aa11.76□□□□□ -0.53
SMG6-202ENST00000354901 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
SMG6-202ENST00000354901 MLECQ14165 292 aa11.76□□□□□ -0.53
SMG6-202ENST00000354901 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
SMG6-202ENST00000354901 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
SMG6-202ENST00000354901 FYB1O15117 783 aa11.76□□□□□ -0.53
SMG6-202ENST00000354901 PHF23Q9BUL5 403 aaPredicted RBP11.76□□□□□ -0.53
SMG6-202ENST00000354901 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
SMG6-202ENST00000354901 UPF2Q9HAU5 1272 aaKnown RBP11.75□□□□□ -0.53
SMG6-202ENST00000354901 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
SMG6-202ENST00000354901 MRE11P49959 708 aa11.75□□□□□ -0.53
SMG6-202ENST00000354901 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
SMG6-202ENST00000354901 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
SMG6-202ENST00000354901 TRIM27P14373 513 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 MCM4P33991 863 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 MSNP26038 577 aaKnown RBP11.74□□□□□ -0.53
SMG6-202ENST00000354901 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
SMG6-202ENST00000354901 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
SMG6-202ENST00000354901 HMOX1P09601 288 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
SMG6-202ENST00000354901 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
SMG6-202ENST00000354901 ARHGEF28Q8N1W1 1705 aaKnown RBP11.73□□□□□ -0.53
SMG6-202ENST00000354901 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
SMG6-202ENST00000354901 WAPLQ7Z5K2 1190 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
SMG6-202ENST00000354901 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 IQSEC2Q5JU85 1478 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
SMG6-202ENST00000354901 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
SMG6-202ENST00000354901 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
SMG6-202ENST00000354901 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
SMG6-202ENST00000354901 ANP32BQ92688 251 aaKnown RBP11.72□□□□□ -0.53
SMG6-202ENST00000354901 ZMYM3Q14202 1370 aa11.71□□□□□ -0.53
SMG6-202ENST00000354901 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
SMG6-202ENST00000354901 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms