RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 PMFBP1Q8TBY8 1022 aa28.83■■■□□ 2.21
PRKAA1-202ENST00000354209 GTF3C3Q9Y5Q9 886 aa28.83■■■□□ 2.21
PRKAA1-202ENST00000354209 CFAP53Q96M91 514 aa28.82■■■□□ 2.2
PRKAA1-202ENST00000354209 PROSER2Q86WR7 435 aaPredicted RBP28.81■■■□□ 2.2
PRKAA1-202ENST00000354209 COL3A1P02461 1466 aaPredicted RBP28.81■■■□□ 2.2
PRKAA1-202ENST00000354209 OVOS2A0A0J9YW53 1432 aa28.79■■■□□ 2.2
PRKAA1-202ENST00000354209 OVOS2Q6IE36 1432 aa28.79■■■□□ 2.2
PRKAA1-202ENST00000354209 NGDNQ8NEJ9 315 aaKnown RBP28.79■■■□□ 2.2
PRKAA1-202ENST00000354209 ZRANB1Q9UGI0 708 aa28.79■■■□□ 2.2
PRKAA1-202ENST00000354209 AATKQ6ZMQ8 1374 aa28.78■■■□□ 2.2
PRKAA1-202ENST00000354209 COG3Q96JB2 828 aa28.78■■■□□ 2.2
PRKAA1-202ENST00000354209 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
PRKAA1-202ENST00000354209 SMG6Q86US8 1419 aaKnown RBP28.77■■■□□ 2.2
PRKAA1-202ENST00000354209 NCOA3Q9Y6Q9 1424 aa28.77■■■□□ 2.2
PRKAA1-202ENST00000354209 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
PRKAA1-202ENST00000354209 C14orf37Q86TY3 774 aa28.77■■■□□ 2.2
PRKAA1-202ENST00000354209 SENP3-EIF4A1A0A087X0R7 540 aa28.76■■■□□ 2.19
PRKAA1-202ENST00000354209 TMEM94Q12767 1356 aa28.74■■■□□ 2.19
PRKAA1-202ENST00000354209 PHF8Q9UPP1 1060 aa28.73■■■□□ 2.19
PRKAA1-202ENST00000354209 POLKQ9UBT6 870 aa28.73■■■□□ 2.19
PRKAA1-202ENST00000354209 PIK3C2AO00443 1686 aa28.72■■■□□ 2.19
PRKAA1-202ENST00000354209 MAP2P11137 1827 aaKnown RBP28.71■■■□□ 2.19
PRKAA1-202ENST00000354209 DCCP43146 1447 aa28.71■■■□□ 2.19
PRKAA1-202ENST00000354209 C19orf44Q9H6X5 657 aa28.71■■■□□ 2.19
PRKAA1-202ENST00000354209 USP31Q70CQ4 1352 aa28.7■■■□□ 2.18
PRKAA1-202ENST00000354209 CDK12Q9NYV4 1490 aaPredicted RBP28.7■■■□□ 2.18
PRKAA1-202ENST00000354209 USP54Q70EL1 1684 aa28.69■■■□□ 2.18
PRKAA1-202ENST00000354209 FBLN1P23142 703 aa28.68■■■□□ 2.18
PRKAA1-202ENST00000354209 CCDC146Q8IYE0 955 aa28.67■■■□□ 2.18
PRKAA1-202ENST00000354209 C1orf167Q5SNV9 1468 aa28.66■■■□□ 2.18
PRKAA1-202ENST00000354209 ESCO1Q5FWF5 840 aa28.65■■■□□ 2.18
PRKAA1-202ENST00000354209 SALL2Q9Y467 1007 aaPredicted RBP28.65■■■□□ 2.18
PRKAA1-202ENST00000354209 EMILIN1Q9Y6C2 1016 aa28.65■■■□□ 2.18
PRKAA1-202ENST00000354209 PDE3BQ13370 1112 aa28.65■■■□□ 2.18
PRKAA1-202ENST00000354209 NUDCQ9Y266 331 aa28.65■■■□□ 2.18
PRKAA1-202ENST00000354209 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.18
PRKAA1-202ENST00000354209 KIF1AQ12756 1690 aa28.63■■■□□ 2.17
PRKAA1-202ENST00000354209 MARF1Q9Y4F3 1742 aaKnown RBP28.63■■■□□ 2.17
PRKAA1-202ENST00000354209 XIRP1Q702N8 1843 aaKnown RBP28.63■■■□□ 2.17
PRKAA1-202ENST00000354209 IQSEC2Q5JU85 1478 aa28.63■■■□□ 2.17
PRKAA1-202ENST00000354209 DIAPH1O60610 1272 aaKnown RBP28.63■■■□□ 2.17
PRKAA1-202ENST00000354209 MST1RQ04912 1400 aa28.62■■■□□ 2.17
PRKAA1-202ENST00000354209 APAF1O14727 1248 aa28.61■■■□□ 2.17
PRKAA1-202ENST00000354209 ORAI2Q96SN7 254 aa28.61■■■□□ 2.17
PRKAA1-202ENST00000354209 ZNF521Q96K83 1311 aa28.6■■■□□ 2.17
PRKAA1-202ENST00000354209 U2AF1L5P0DN76 240 aaPredicted RBP28.6■■■□□ 2.17
PRKAA1-202ENST00000354209 U2AF1Q01081 240 aaKnown RBP eCLIP28.6■■■□□ 2.17
PRKAA1-202ENST00000354209 RRS1Q15050 365 aaKnown RBP28.6■■■□□ 2.17
PRKAA1-202ENST00000354209 RUNDC1Q96C34 613 aa28.6■■■□□ 2.17
PRKAA1-202ENST00000354209 PPM1GO15355 546 aaPredicted RBP28.59■■■□□ 2.17
PRKAA1-202ENST00000354209 NGEFQ8N5V2 710 aa28.59■■■□□ 2.17
PRKAA1-202ENST00000354209 ATF3P18847 181 aa28.58■■■□□ 2.17
PRKAA1-202ENST00000354209 ZNF335Q9H4Z2 1342 aaPredicted RBP28.57■■■□□ 2.16
PRKAA1-202ENST00000354209 MSH6P52701 1360 aa28.56■■■□□ 2.16
PRKAA1-202ENST00000354209 PEAK1Q9H792 1746 aa28.56■■■□□ 2.16
PRKAA1-202ENST00000354209 U2SURPO15042 1029 aaKnown RBP28.55■■■□□ 2.16
PRKAA1-202ENST00000354209 PSME1Q06323 249 aa28.54■■■□□ 2.16
PRKAA1-202ENST00000354209 CADPS2Q86UW7 1296 aa28.54■■■□□ 2.16
PRKAA1-202ENST00000354209 NLRP6P59044 892 aa28.53■■■□□ 2.16
PRKAA1-202ENST00000354209 ABTB2Q8N961 1025 aa28.53■■■□□ 2.16
PRKAA1-202ENST00000354209 TRPM3Q9HCF6 1732 aaPredicted RBP28.53■■■□□ 2.16
PRKAA1-202ENST00000354209 PAK3O75914 559 aaPredicted RBP28.52■■■□□ 2.16
PRKAA1-202ENST00000354209 IL13P35225 146 aa28.52■■■□□ 2.16
PRKAA1-202ENST00000354209 SUPT16HQ9Y5B9 1047 aaKnown RBP28.52■■■□□ 2.16
PRKAA1-202ENST00000354209 CDCA7LQ96GN5 454 aa28.51■■■□□ 2.16
PRKAA1-202ENST00000354209 FOXO3O43524 673 aa28.51■■■□□ 2.15
PRKAA1-202ENST00000354209 PLEKHF1Q96S99 279 aa28.51■■■□□ 2.15
PRKAA1-202ENST00000354209 DMRT2Q9Y5R5 561 aa28.51■■■□□ 2.15
PRKAA1-202ENST00000354209 TCP11L2Q8N4U5 519 aa28.5■■■□□ 2.15
PRKAA1-202ENST00000354209 NCBP3Q53F19 620 aaKnown RBP28.49■■■□□ 2.15
PRKAA1-202ENST00000354209 MAP3K19Q56UN5 1328 aa28.48■■■□□ 2.15
PRKAA1-202ENST00000354209 SBNO1A3KN83 1393 aa28.47■■■□□ 2.15
PRKAA1-202ENST00000354209 NUTM2GQ5VZR2 741 aa28.47■■■□□ 2.15
PRKAA1-202ENST00000354209 PHF23Q9BUL5 403 aaPredicted RBP28.47■■■□□ 2.15
PRKAA1-202ENST00000354209 FCHSD2O94868 740 aa28.46■■■□□ 2.15
PRKAA1-202ENST00000354209 SOX12O15370 315 aa28.45■■■□□ 2.15
PRKAA1-202ENST00000354209 GOLGA2Q08379 1002 aa28.45■■■□□ 2.15
PRKAA1-202ENST00000354209 FLT4P35916 1363 aa28.45■■■□□ 2.14
PRKAA1-202ENST00000354209 KIF24Q5T7B8 1368 aa28.45■■■□□ 2.14
PRKAA1-202ENST00000354209 RSPH6AQ9H0K4 717 aa28.45■■■□□ 2.14
PRKAA1-202ENST00000354209 PNNQ9H307 717 aaKnown RBP28.45■■■□□ 2.14
PRKAA1-202ENST00000354209 NFAT5O94916 1531 aa28.44■■■□□ 2.14
PRKAA1-202ENST00000354209 NEFLP07196 543 aa28.43■■■□□ 2.14
PRKAA1-202ENST00000354209 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
PRKAA1-202ENST00000354209 KRT28Q7Z3Y7 464 aa28.43■■■□□ 2.14
PRKAA1-202ENST00000354209 WWC1Q8IX03 1113 aa28.43■■■□□ 2.14
PRKAA1-202ENST00000354209 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
PRKAA1-202ENST00000354209 EIF4A2Q14240 407 aaKnown RBP28.42■■■□□ 2.14
PRKAA1-202ENST00000354209 RGPD1P0DJD0 1748 aa28.42■■■□□ 2.14
PRKAA1-202ENST00000354209 ALS2Q96Q42 1657 aa28.41■■■□□ 2.14
PRKAA1-202ENST00000354209 RRP7AQ9Y3A4 280 aaKnown RBP28.41■■■□□ 2.14
PRKAA1-202ENST00000354209 SLIT3O75094 1523 aa28.41■■■□□ 2.14
PRKAA1-202ENST00000354209 HSP90AB2PQ58FF8 381 aa28.41■■■□□ 2.14
PRKAA1-202ENST00000354209 MAPK8IP3Q9UPT6 1336 aa28.41■■■□□ 2.14
PRKAA1-202ENST00000354209 SLFN5Q08AF3 891 aa28.4■■■□□ 2.14
PRKAA1-202ENST00000354209 DUSP27Q5VZP5 1158 aa28.39■■■□□ 2.14
PRKAA1-202ENST00000354209 FKBP8Q14318 412 aa28.39■■■□□ 2.13
PRKAA1-202ENST00000354209 TRMT2AQ8IZ69 625 aaKnown RBP28.39■■■□□ 2.13
PRKAA1-202ENST00000354209 RNF123Q5XPI4 1314 aa28.39■■■□□ 2.13
PRKAA1-202ENST00000354209 RTL1A6NKG5 1358 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms