RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CABP2Q9NPB3 220 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 CD163L1Q9NR16 1453 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 VIRMAQ69YN4 1812 aaKnown RBP4.79□□□□□ -1.64
RNF38-203ENST00000353739 MTHFSP49914 203 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 PHF23Q9BUL5 403 aaPredicted RBP4.79□□□□□ -1.64
RNF38-203ENST00000353739 PNPLA6Q8IY17 1366 aa4.79□□□□□ -1.64
RNF38-203ENST00000353739 IPO8O15397 1037 aaKnown RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 CFAP65Q6ZU64 1925 aaKnown RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 SLIT1O75093 1534 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 FCHSD2O94868 740 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 PPIP5K1Q6PFW1 1433 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 C3P01024 1663 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 U2AF1L5P0DN76 240 aaPredicted RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 PDE4AP27815 886 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 U2AF1Q01081 240 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNF38-203ENST00000353739 FAM161AQ3B820 660 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 TCP11L2Q8N4U5 519 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 STK26Q9P289 416 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 CPSF1Q10570 1443 aaKnown RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 KIF16BQ96L93 1317 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 TMEM2Q9UHN6 1383 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 PPM1GO15355 546 aaPredicted RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 PTCH1Q13635 1447 aa4.78□□□□□ -1.64
RNF38-203ENST00000353739 MINK1Q8N4C8 1332 aaPredicted RBP4.78□□□□□ -1.64
RNF38-203ENST00000353739 ALDH1L2Q3SY69 923 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 RTL5Q5HYW3 569 aaPredicted RBP4.77□□□□□ -1.65
RNF38-203ENST00000353739 BACH2Q9BYV9 841 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 EID1Q9Y6B2 187 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 FER1L4A9Z1Z3 1794 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 WASLO00401 505 aaPredicted RBP4.77□□□□□ -1.65
RNF38-203ENST00000353739 PLPPR3Q6T4P5 718 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 CFAP44Q96MT7 982 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 ZKSCAN2Q63HK3 967 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 CLUAP1Q96AJ1 413 aa4.77□□□□□ -1.65
RNF38-203ENST00000353739 COG3Q96JB2 828 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 UPF2Q9HAU5 1272 aaKnown RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 USP35Q9P2H5 1018 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 PIK3R4Q99570 1358 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 USP54Q70EL1 1684 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 FTSJ3Q8IY81 847 aaKnown RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 ANKARQ7Z5J8 1434 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 ARHGAP23Q9P227 1491 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 NALCNQ8IZF0 1738 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 RARSP54136 660 aaKnown RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 NUTM2DQ5VT03 806 aaPredicted RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 FBXO31Q5XUX0 539 aaPredicted RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 DDX19BQ9UMR2 479 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 TTC21AQ8NDW8 1320 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 KIF24Q5T7B8 1368 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 U2SURPO15042 1029 aaKnown RBP4.76□□□□□ -1.65
RNF38-203ENST00000353739 FYB1O15117 783 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 PLIN1O60240 522 aa4.76□□□□□ -1.65
RNF38-203ENST00000353739 BRPF1P55201 1214 aaPredicted RBP4.75□□□□□ -1.65
RNF38-203ENST00000353739 PLEKHF1Q96S99 279 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 TTC21BQ7Z4L5 1316 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 TMPOP42166 694 aaKnown RBP4.75□□□□□ -1.65
RNF38-203ENST00000353739 TNNT2P45379 298 aaPredicted RBP4.75□□□□□ -1.65
RNF38-203ENST00000353739 GNAI1P63096 354 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 BECN1Q14457 450 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 CABP1Q9NZU7 370 aa4.75□□□□□ -1.65
RNF38-203ENST00000353739 ZNF142P52746 1687 aaPredicted RBP4.75□□□□□ -1.65
RNF38-203ENST00000353739 SAFB2Q14151 953 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNF38-203ENST00000353739 MVPQ14764 893 aaKnown RBP4.74□□□□□ -1.65
RNF38-203ENST00000353739 NFE2L2Q16236 605 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 DZIP1LQ8IYY4 767 aaKnown RBP4.74□□□□□ -1.65
RNF38-203ENST00000353739 CCDC61Q9Y6R9 512 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 NUDT16Q96DE0 195 aaKnown RBP4.74□□□□□ -1.65
RNF38-203ENST00000353739 GGNBP2Q9H3C7 697 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 XRN1Q8IZH2 1706 aaKnown RBP4.74□□□□□ -1.65
RNF38-203ENST00000353739 FMN2Q9NZ56 1722 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 ARHGAP45Q92619 1136 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 ARHGEF10O15013 1369 aa4.74□□□□□ -1.65
RNF38-203ENST00000353739 MSH5O43196 834 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 RIPK4P57078 832 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 SMC4Q9NTJ3 1288 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 THEMISQ8N1K5 641 aaPredicted RBP4.73□□□□□ -1.65
RNF38-203ENST00000353739 ADAMTS13Q76LX8 1427 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 BCAR3O75815 825 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 METP08581 1390 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 SOS1Q07889 1333 aaPredicted RBP4.73□□□□□ -1.65
RNF38-203ENST00000353739 PLEKHG3A1L390 1219 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 HDAC1Q13547 482 aaPredicted RBP4.73□□□□□ -1.65
RNF38-203ENST00000353739 MLECQ14165 292 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 C20orf194Q5TEA3 1177 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 FRAT1Q92837 279 aaPredicted RBP4.73□□□□□ -1.65
RNF38-203ENST00000353739 CHMP4AQ9BY43 222 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 RSPH6AQ9H0K4 717 aa4.73□□□□□ -1.65
RNF38-203ENST00000353739 NEUROD2Q15784 382 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 TBX22Q9Y458 520 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 USP6P35125 1406 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 API5Q9BZZ5 524 aaKnown RBP4.72□□□□□ -1.65
RNF38-203ENST00000353739 USP31Q70CQ4 1352 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 CEP170BQ9Y4F5 1589 aaPredicted RBP4.72□□□□□ -1.65
RNF38-203ENST00000353739 OVOS2A0A0J9YW53 1432 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 OVOS2Q6IE36 1432 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
RNF38-203ENST00000353739 RGPD1P0DJD0 1748 aa4.72□□□□□ -1.65
RNF38-203ENST00000353739 PTPRUQ92729 1446 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms