RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
DDX4-201ENST00000353507 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
DDX4-201ENST00000353507 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
DDX4-201ENST00000353507 PREX1Q8TCU6 1659 aa15.42■□□□□ 0.06
DDX4-201ENST00000353507 RICTORQ6R327 1708 aa15.42■□□□□ 0.06
DDX4-201ENST00000353507 PLEKHF1Q96S99 279 aa15.41■□□□□ 0.06
DDX4-201ENST00000353507 SLKQ9H2G2 1235 aaPredicted RBP15.41■□□□□ 0.06
DDX4-201ENST00000353507 PTPRMP28827 1452 aa15.41■□□□□ 0.06
DDX4-201ENST00000353507 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
DDX4-201ENST00000353507 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
DDX4-201ENST00000353507 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
DDX4-201ENST00000353507 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
DDX4-201ENST00000353507 TMEM131LA2VDJ0 1609 aa15.4■□□□□ 0.06
DDX4-201ENST00000353507 MED14O60244 1454 aa15.4■□□□□ 0.06
DDX4-201ENST00000353507 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
DDX4-201ENST00000353507 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
DDX4-201ENST00000353507 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
DDX4-201ENST00000353507 TRIM35Q9UPQ4 493 aa15.4■□□□□ 0.06
DDX4-201ENST00000353507 YTHDC2Q9H6S0 1430 aaKnown RBP15.4■□□□□ 0.06
DDX4-201ENST00000353507 FYB1O15117 783 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 TRIM27P14373 513 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 KIF20BQ96Q89 1820 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 IL16Q14005 1332 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
DDX4-201ENST00000353507 RIPK4P57078 832 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
DDX4-201ENST00000353507 ATF7IPQ6VMQ6 1270 aa15.38■□□□□ 0.05
DDX4-201ENST00000353507 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
DDX4-201ENST00000353507 CD163L1Q9NR16 1453 aa15.37■□□□□ 0.05
DDX4-201ENST00000353507 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
DDX4-201ENST00000353507 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
DDX4-201ENST00000353507 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
DDX4-201ENST00000353507 IPO8O15397 1037 aaKnown RBP15.35■□□□□ 0.05
DDX4-201ENST00000353507 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
DDX4-201ENST00000353507 TBC1D2Q9BYX2 928 aa15.35■□□□□ 0.05
DDX4-201ENST00000353507 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
DDX4-201ENST00000353507 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
DDX4-201ENST00000353507 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
DDX4-201ENST00000353507 MFAP1P55081 439 aaKnown RBP15.33■□□□□ 0.04
DDX4-201ENST00000353507 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
DDX4-201ENST00000353507 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
DDX4-201ENST00000353507 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
DDX4-201ENST00000353507 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
DDX4-201ENST00000353507 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
DDX4-201ENST00000353507 CDC42BPGQ6DT37 1551 aa15.31■□□□□ 0.04
DDX4-201ENST00000353507 ARHGEF40Q8TER5 1519 aa15.31■□□□□ 0.04
DDX4-201ENST00000353507 FCHSD2O94868 740 aa15.31■□□□□ 0.04
DDX4-201ENST00000353507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX4-201ENST00000353507 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
DDX4-201ENST00000353507 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
DDX4-201ENST00000353507 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
DDX4-201ENST00000353507 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
DDX4-201ENST00000353507 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
DDX4-201ENST00000353507 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
DDX4-201ENST00000353507 FAM135BQ49AJ0 1406 aa15.29■□□□□ 0.04
DDX4-201ENST00000353507 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
DDX4-201ENST00000353507 ATP7BP35670 1465 aa15.28■□□□□ 0.04
DDX4-201ENST00000353507 MAP2P11137 1827 aaKnown RBP15.28■□□□□ 0.04
DDX4-201ENST00000353507 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
DDX4-201ENST00000353507 ZNF428Q96B54 188 aa15.27■□□□□ 0.03
DDX4-201ENST00000353507 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
DDX4-201ENST00000353507 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
DDX4-201ENST00000353507 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
DDX4-201ENST00000353507 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
DDX4-201ENST00000353507 HMOX1P09601 288 aa15.25■□□□□ 0.03
DDX4-201ENST00000353507 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
DDX4-201ENST00000353507 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
DDX4-201ENST00000353507 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
DDX4-201ENST00000353507 NUCB1Q02818 461 aa15.25■□□□□ 0.03
DDX4-201ENST00000353507 FBLN1P23142 703 aa15.24■□□□□ 0.03
DDX4-201ENST00000353507 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
DDX4-201ENST00000353507 PPIP5K1Q6PFW1 1433 aa15.24■□□□□ 0.03
DDX4-201ENST00000353507 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
DDX4-201ENST00000353507 CHMP5Q9NZZ3 219 aa15.24■□□□□ 0.03
DDX4-201ENST00000353507 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
DDX4-201ENST00000353507 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
DDX4-201ENST00000353507 GNAI1P63096 354 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
DDX4-201ENST00000353507 RIMS2Q9UQ26 1411 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
DDX4-201ENST00000353507 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
DDX4-201ENST00000353507 EMILIN1Q9Y6C2 1016 aa15.21■□□□□ 0.03
DDX4-201ENST00000353507 SETD1AO15047 1707 aaKnown RBP15.21■□□□□ 0.03
DDX4-201ENST00000353507 PTCH1Q13635 1447 aa15.21■□□□□ 0.03
DDX4-201ENST00000353507 MCM4P33991 863 aa15.21■□□□□ 0.03
DDX4-201ENST00000353507 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
DDX4-201ENST00000353507 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.02
DDX4-201ENST00000353507 CDK12Q9NYV4 1490 aaPredicted RBP15.21■□□□□ 0.02
DDX4-201ENST00000353507 VAMP4O75379 141 aa15.2■□□□□ 0.02
DDX4-201ENST00000353507 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
DDX4-201ENST00000353507 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
DDX4-201ENST00000353507 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
DDX4-201ENST00000353507 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
DDX4-201ENST00000353507 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
DDX4-201ENST00000353507 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
DDX4-201ENST00000353507 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 305.7 ms