RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
RIPK4-202ENST00000352483 TRIM27P14373 513 aa16.38■□□□□ 0.21
RIPK4-202ENST00000352483 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
RIPK4-202ENST00000352483 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
RIPK4-202ENST00000352483 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
RIPK4-202ENST00000352483 F6X3S4 739 aa16.38■□□□□ 0.21
RIPK4-202ENST00000352483 CLTCL1P53675 1640 aa16.36■□□□□ 0.21
RIPK4-202ENST00000352483 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
RIPK4-202ENST00000352483 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
RIPK4-202ENST00000352483 ERVK-7P63135 1459 aa16.36■□□□□ 0.21
RIPK4-202ENST00000352483 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
RIPK4-202ENST00000352483 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
RIPK4-202ENST00000352483 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
RIPK4-202ENST00000352483 PTPRTO14522 1441 aa16.35■□□□□ 0.21
RIPK4-202ENST00000352483 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
RIPK4-202ENST00000352483 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
RIPK4-202ENST00000352483 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
RIPK4-202ENST00000352483 SEC24BO95487 1268 aa16.35■□□□□ 0.21
RIPK4-202ENST00000352483 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
RIPK4-202ENST00000352483 MS4A1P11836 297 aa16.35■□□□□ 0.21
RIPK4-202ENST00000352483 AIMP1Q12904 312 aaKnown RBP16.35■□□□□ 0.21
RIPK4-202ENST00000352483 UHRF1BP1LA0JNW5 1464 aa16.34■□□□□ 0.21
RIPK4-202ENST00000352483 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
RIPK4-202ENST00000352483 ANXA1P04083 346 aa16.34■□□□□ 0.21
RIPK4-202ENST00000352483 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
RIPK4-202ENST00000352483 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
RIPK4-202ENST00000352483 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
RIPK4-202ENST00000352483 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
RIPK4-202ENST00000352483 MVPQ14764 893 aaKnown RBP16.33■□□□□ 0.21
RIPK4-202ENST00000352483 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
RIPK4-202ENST00000352483 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
RIPK4-202ENST00000352483 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.2
RIPK4-202ENST00000352483 THEMISQ8N1K5 641 aaPredicted RBP16.33■□□□□ 0.2
RIPK4-202ENST00000352483 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.2
RIPK4-202ENST00000352483 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
RIPK4-202ENST00000352483 GNAI1P63096 354 aa16.32■□□□□ 0.2
RIPK4-202ENST00000352483 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
RIPK4-202ENST00000352483 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
RIPK4-202ENST00000352483 E9PCH4 1651 aa16.32■□□□□ 0.2
RIPK4-202ENST00000352483 KCNA6P17658 529 aa16.31■□□□□ 0.2
RIPK4-202ENST00000352483 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
RIPK4-202ENST00000352483 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
RIPK4-202ENST00000352483 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
RIPK4-202ENST00000352483 METP08581 1390 aa16.31■□□□□ 0.2
RIPK4-202ENST00000352483 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
RIPK4-202ENST00000352483 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
RIPK4-202ENST00000352483 FCHSD2O94868 740 aa16.3■□□□□ 0.2
RIPK4-202ENST00000352483 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
RIPK4-202ENST00000352483 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
RIPK4-202ENST00000352483 CALD1Q05682 793 aaKnown RBP16.3■□□□□ 0.2
RIPK4-202ENST00000352483 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
RIPK4-202ENST00000352483 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
RIPK4-202ENST00000352483 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 PPIP5K1Q6PFW1 1433 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 TEFQ10587 303 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
RIPK4-202ENST00000352483 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
RIPK4-202ENST00000352483 TNRQ92752 1358 aa16.28■□□□□ 0.2
RIPK4-202ENST00000352483 HSPA2P54652 639 aa16.28■□□□□ 0.2
RIPK4-202ENST00000352483 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
RIPK4-202ENST00000352483 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.2
RIPK4-202ENST00000352483 TRPM2O94759 1503 aa16.27■□□□□ 0.19
RIPK4-202ENST00000352483 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.19
RIPK4-202ENST00000352483 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
RIPK4-202ENST00000352483 GSE1Q14687 1217 aa16.26■□□□□ 0.19
RIPK4-202ENST00000352483 LRRC59Q96AG4 307 aaKnown RBP16.26■□□□□ 0.19
RIPK4-202ENST00000352483 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
RIPK4-202ENST00000352483 ANP32BQ92688 251 aaKnown RBP16.26■□□□□ 0.19
RIPK4-202ENST00000352483 MAP4K4O95819 1239 aaPredicted RBP16.25■□□□□ 0.19
RIPK4-202ENST00000352483 RNF123Q5XPI4 1314 aa16.25■□□□□ 0.19
RIPK4-202ENST00000352483 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
RIPK4-202ENST00000352483 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
RIPK4-202ENST00000352483 CEP152O94986 1710 aa16.25■□□□□ 0.19
RIPK4-202ENST00000352483 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
RIPK4-202ENST00000352483 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
RIPK4-202ENST00000352483 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
RIPK4-202ENST00000352483 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
RIPK4-202ENST00000352483 SETD1BQ9UPS6 1966 aaKnown RBP16.24■□□□□ 0.19
RIPK4-202ENST00000352483 POLR3AO14802 1390 aaPredicted RBP16.23■□□□□ 0.19
RIPK4-202ENST00000352483 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
RIPK4-202ENST00000352483 CHRNA2Q15822 529 aa16.23■□□□□ 0.19
RIPK4-202ENST00000352483 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
RIPK4-202ENST00000352483 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
RIPK4-202ENST00000352483 UNC13BO14795 1591 aa16.22■□□□□ 0.19
RIPK4-202ENST00000352483 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
RIPK4-202ENST00000352483 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
RIPK4-202ENST00000352483 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
RIPK4-202ENST00000352483 PIK3C2GO75747 1445 aa16.22■□□□□ 0.19
RIPK4-202ENST00000352483 C22orf23Q9BZE7 217 aa16.21■□□□□ 0.19
RIPK4-202ENST00000352483 IL1RAPL2Q9NP60 686 aa16.21■□□□□ 0.19
RIPK4-202ENST00000352483 ORAI2Q96SN7 254 aa16.21■□□□□ 0.19
RIPK4-202ENST00000352483 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.18
RIPK4-202ENST00000352483 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
RIPK4-202ENST00000352483 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
RIPK4-202ENST00000352483 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
RIPK4-202ENST00000352483 C8orf34Q49A92 452 aa16.2■□□□□ 0.18
RIPK4-202ENST00000352483 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
RIPK4-202ENST00000352483 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms