RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
SMC6-201ENST00000351948 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
SMC6-201ENST00000351948 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
SMC6-201ENST00000351948 VPS37DQ86XT2 251 aa16.9■□□□□ 0.3
SMC6-201ENST00000351948 ABCC2Q92887 1545 aa16.9■□□□□ 0.3
SMC6-201ENST00000351948 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
SMC6-201ENST00000351948 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
SMC6-201ENST00000351948 APPP05067 770 aa16.88■□□□□ 0.29
SMC6-201ENST00000351948 TEX14Q8IWB6 1497 aa16.88■□□□□ 0.29
SMC6-201ENST00000351948 FCHSD2O94868 740 aa16.87■□□□□ 0.29
SMC6-201ENST00000351948 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
SMC6-201ENST00000351948 SURF6O75683 361 aaKnown RBP16.87■□□□□ 0.29
SMC6-201ENST00000351948 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
SMC6-201ENST00000351948 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
SMC6-201ENST00000351948 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
SMC6-201ENST00000351948 SCAF11Q99590 1463 aaKnown RBP16.87■□□□□ 0.29
SMC6-201ENST00000351948 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
SMC6-201ENST00000351948 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
SMC6-201ENST00000351948 ACEP12821 1306 aa16.86■□□□□ 0.29
SMC6-201ENST00000351948 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
SMC6-201ENST00000351948 DNTTIP2Q5QJE6 756 aaKnown RBP16.86■□□□□ 0.29
SMC6-201ENST00000351948 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
SMC6-201ENST00000351948 ST18O60284 1047 aa16.85■□□□□ 0.29
SMC6-201ENST00000351948 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
SMC6-201ENST00000351948 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
SMC6-201ENST00000351948 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
SMC6-201ENST00000351948 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
SMC6-201ENST00000351948 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
SMC6-201ENST00000351948 RAD21O60216 631 aa16.84■□□□□ 0.29
SMC6-201ENST00000351948 CEP170Q5SW79 1584 aa16.84■□□□□ 0.29
SMC6-201ENST00000351948 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
SMC6-201ENST00000351948 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.29
SMC6-201ENST00000351948 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
SMC6-201ENST00000351948 SIL1Q9H173 461 aa16.83■□□□□ 0.28
SMC6-201ENST00000351948 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
SMC6-201ENST00000351948 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 WDR63Q8IWG1 891 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 CLSTN1O94985 981 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
SMC6-201ENST00000351948 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
SMC6-201ENST00000351948 GNAI3P08754 354 aa16.81■□□□□ 0.28
SMC6-201ENST00000351948 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
SMC6-201ENST00000351948 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
SMC6-201ENST00000351948 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
SMC6-201ENST00000351948 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
SMC6-201ENST00000351948 FYB1O15117 783 aa16.79■□□□□ 0.28
SMC6-201ENST00000351948 ATF7IPQ6VMQ6 1270 aa16.79■□□□□ 0.28
SMC6-201ENST00000351948 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
SMC6-201ENST00000351948 WASHC4Q2M389 1173 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 REC8O95072 547 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
SMC6-201ENST00000351948 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
SMC6-201ENST00000351948 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
SMC6-201ENST00000351948 BICDL1Q6ZP65 573 aa16.77■□□□□ 0.28
SMC6-201ENST00000351948 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
SMC6-201ENST00000351948 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
SMC6-201ENST00000351948 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.28
SMC6-201ENST00000351948 GNAI2P04899 355 aa16.77■□□□□ 0.27
SMC6-201ENST00000351948 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.27
SMC6-201ENST00000351948 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.27
SMC6-201ENST00000351948 NGLY1Q96IV0 654 aa16.76■□□□□ 0.27
SMC6-201ENST00000351948 ZKSCAN1P17029 563 aaPredicted RBP16.76■□□□□ 0.27
SMC6-201ENST00000351948 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
SMC6-201ENST00000351948 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
SMC6-201ENST00000351948 DRC7Q8IY82 874 aa16.76■□□□□ 0.27
SMC6-201ENST00000351948 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
SMC6-201ENST00000351948 KCNA6P17658 529 aa16.75■□□□□ 0.27
SMC6-201ENST00000351948 CADPS2Q86UW7 1296 aa16.75■□□□□ 0.27
SMC6-201ENST00000351948 PDE3AQ14432 1141 aa16.75■□□□□ 0.27
SMC6-201ENST00000351948 ERC2O15083 957 aa16.75■□□□□ 0.27
SMC6-201ENST00000351948 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
SMC6-201ENST00000351948 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
SMC6-201ENST00000351948 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
SMC6-201ENST00000351948 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
SMC6-201ENST00000351948 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
SMC6-201ENST00000351948 FAM184AQ8NB25 1140 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 FSD1Q9BTV5 496 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 H3BQV1 296 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 IFFO2Q5TF58 517 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
SMC6-201ENST00000351948 FOSBP53539 338 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
SMC6-201ENST00000351948 TMEM57Q8N5G2 664 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 CFAP43Q8NDM7 1665 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
SMC6-201ENST00000351948 CNNM1Q9NRU3 951 aa16.73■□□□□ 0.27
SMC6-201ENST00000351948 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
SMC6-201ENST00000351948 F6X3S4 739 aa16.72■□□□□ 0.27
SMC6-201ENST00000351948 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
SMC6-201ENST00000351948 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
SMC6-201ENST00000351948 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
SMC6-201ENST00000351948 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
SMC6-201ENST00000351948 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms