RNA–Protein interactions for RNA: ENST00000350612.10

SUPT20H-201, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,739 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-201ENST00000350612 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.88
SUPT20H-201ENST00000350612 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
SUPT20H-201ENST00000350612 NPHP4O75161 1426 aaPredicted RBP20.57■□□□□ 0.88
SUPT20H-201ENST00000350612 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
SUPT20H-201ENST00000350612 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
SUPT20H-201ENST00000350612 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
SUPT20H-201ENST00000350612 PPP4R2Q9NY27 417 aa20.56■□□□□ 0.88
SUPT20H-201ENST00000350612 USP6P35125 1406 aa20.56■□□□□ 0.88
SUPT20H-201ENST00000350612 CCDC27Q2M243 656 aa20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 TRMT2AQ8IZ69 625 aaKnown RBP20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 RCAN3Q9UKA8 241 aa20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 SSH2Q76I76 1423 aa20.55■□□□□ 0.88
SUPT20H-201ENST00000350612 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
SUPT20H-201ENST00000350612 APAF1O14727 1248 aa20.52■□□□□ 0.88
SUPT20H-201ENST00000350612 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
SUPT20H-201ENST00000350612 RGPD8O14715 1765 aaPredicted RBP20.52■□□□□ 0.88
SUPT20H-201ENST00000350612 OVOS2A0A0J9YW53 1432 aa20.52■□□□□ 0.88
SUPT20H-201ENST00000350612 OVOS2Q6IE36 1432 aa20.52■□□□□ 0.88
SUPT20H-201ENST00000350612 SLFN5Q08AF3 891 aa20.52■□□□□ 0.87
SUPT20H-201ENST00000350612 E9PSI1 815 aa20.51■□□□□ 0.87
SUPT20H-201ENST00000350612 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
SUPT20H-201ENST00000350612 CDCA7LQ96GN5 454 aa20.5■□□□□ 0.87
SUPT20H-201ENST00000350612 COG3Q96JB2 828 aa20.5■□□□□ 0.87
SUPT20H-201ENST00000350612 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
SUPT20H-201ENST00000350612 DUSP27Q5VZP5 1158 aa20.5■□□□□ 0.87
SUPT20H-201ENST00000350612 ACEP12821 1306 aa20.49■□□□□ 0.87
SUPT20H-201ENST00000350612 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
SUPT20H-201ENST00000350612 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
SUPT20H-201ENST00000350612 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
SUPT20H-201ENST00000350612 KCNA6P17658 529 aa20.48■□□□□ 0.87
SUPT20H-201ENST00000350612 WDR63Q8IWG1 891 aa20.48■□□□□ 0.87
SUPT20H-201ENST00000350612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.879e-7■■□□□ 13.4
SUPT20H-201ENST00000350612 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
SUPT20H-201ENST00000350612 USP31Q70CQ4 1352 aa20.48■□□□□ 0.87
SUPT20H-201ENST00000350612 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
SUPT20H-201ENST00000350612 NME9Q86XW9 330 aa20.46■□□□□ 0.87
SUPT20H-201ENST00000350612 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
SUPT20H-201ENST00000350612 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
SUPT20H-201ENST00000350612 WWC1Q8IX03 1113 aa20.45■□□□□ 0.86
SUPT20H-201ENST00000350612 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
SUPT20H-201ENST00000350612 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.86
SUPT20H-201ENST00000350612 PIK3C2AO00443 1686 aa20.44■□□□□ 0.86
SUPT20H-201ENST00000350612 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
SUPT20H-201ENST00000350612 FCHSD2O94868 740 aa20.43■□□□□ 0.86
SUPT20H-201ENST00000350612 SENP3-EIF4A1A0A087X0R7 540 aa20.42■□□□□ 0.86
SUPT20H-201ENST00000350612 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
SUPT20H-201ENST00000350612 MARF1Q9Y4F3 1742 aaKnown RBP20.41■□□□□ 0.86
SUPT20H-201ENST00000350612 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.86
SUPT20H-201ENST00000350612 NCOA3Q9Y6Q9 1424 aa20.39■□□□□ 0.85
SUPT20H-201ENST00000350612 IL16Q14005 1332 aa20.39■□□□□ 0.85
SUPT20H-201ENST00000350612 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
SUPT20H-201ENST00000350612 KIF1AQ12756 1690 aa20.39■□□□□ 0.85
SUPT20H-201ENST00000350612 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
SUPT20H-201ENST00000350612 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
SUPT20H-201ENST00000350612 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
SUPT20H-201ENST00000350612 IL13P35225 146 aa20.37■□□□□ 0.85
SUPT20H-201ENST00000350612 PEAK1Q9H792 1746 aa20.37■□□□□ 0.85
SUPT20H-201ENST00000350612 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
SUPT20H-201ENST00000350612 CT47B1P0C2W7 299 aaPredicted RBP20.35■□□□□ 0.85
SUPT20H-201ENST00000350612 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
SUPT20H-201ENST00000350612 MYH16Q9H6N6 1097 aa20.35■□□□□ 0.85
SUPT20H-201ENST00000350612 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
SUPT20H-201ENST00000350612 NEFMP07197 916 aa20.34■□□□□ 0.85
SUPT20H-201ENST00000350612 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
SUPT20H-201ENST00000350612 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
SUPT20H-201ENST00000350612 DCCP43146 1447 aa20.32■□□□□ 0.84
SUPT20H-201ENST00000350612 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
SUPT20H-201ENST00000350612 PHRF1Q9P1Y6 1649 aaKnown RBP20.32■□□□□ 0.84
SUPT20H-201ENST00000350612 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
SUPT20H-201ENST00000350612 PHF8Q9UPP1 1060 aa20.3■□□□□ 0.84
SUPT20H-201ENST00000350612 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
SUPT20H-201ENST00000350612 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
SUPT20H-201ENST00000350612 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
SUPT20H-201ENST00000350612 FLT4P35916 1363 aa20.29■□□□□ 0.84
SUPT20H-201ENST00000350612 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 MST1RQ04912 1400 aa20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
SUPT20H-201ENST00000350612 PPM1GO15355 546 aaPredicted RBP20.27■□□□□ 0.84
SUPT20H-201ENST00000350612 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
SUPT20H-201ENST00000350612 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.83
SUPT20H-201ENST00000350612 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 STRCP1A6NGW2 1772 aa20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
SUPT20H-201ENST00000350612 RIPK4P57078 832 aa20.25■□□□□ 0.83
SUPT20H-201ENST00000350612 NEUROD2Q15784 382 aa20.25■□□□□ 0.83
SUPT20H-201ENST00000350612 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
SUPT20H-201ENST00000350612 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
SUPT20H-201ENST00000350612 LTN1O94822 1766 aa20.23■□□□□ 0.83
SUPT20H-201ENST00000350612 NFAT5O94916 1531 aa20.23■□□□□ 0.83
SUPT20H-201ENST00000350612 EXOC6Q8TAG9 804 aa20.23■□□□□ 0.83
SUPT20H-201ENST00000350612 SLIT3O75094 1523 aa20.22■□□□□ 0.83
SUPT20H-201ENST00000350612 FBLN1P23142 703 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms