RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF142P52746 1687 aaPredicted RBP21.8■■□□□ 1.08
SAMM50-201ENST00000350028 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
SAMM50-201ENST00000350028 ADGRB2O60241 1585 aa21.79■■□□□ 1.08
SAMM50-201ENST00000350028 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
SAMM50-201ENST00000350028 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
SAMM50-201ENST00000350028 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
SAMM50-201ENST00000350028 CDC42BPGQ6DT37 1551 aa21.79■■□□□ 1.08
SAMM50-201ENST00000350028 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
SAMM50-201ENST00000350028 NEUROD2Q15784 382 aa21.77■■□□□ 1.08
SAMM50-201ENST00000350028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.77■■□□□ 1.08
SAMM50-201ENST00000350028 RRP7AQ9Y3A4 280 aaKnown RBP21.77■■□□□ 1.08
SAMM50-201ENST00000350028 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
SAMM50-201ENST00000350028 PNNQ9H307 717 aaKnown RBP21.76■■□□□ 1.07
SAMM50-201ENST00000350028 U2SURPO15042 1029 aaKnown RBP21.75■■□□□ 1.07
SAMM50-201ENST00000350028 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
SAMM50-201ENST00000350028 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
SAMM50-201ENST00000350028 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
SAMM50-201ENST00000350028 TBX22Q9Y458 520 aa21.75■■□□□ 1.07
SAMM50-201ENST00000350028 AKAP12Q02952 1782 aa21.74■■□□□ 1.07
SAMM50-201ENST00000350028 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
SAMM50-201ENST00000350028 PLEKHF1Q96S99 279 aa21.74■■□□□ 1.07
SAMM50-201ENST00000350028 ITSN1Q15811 1721 aa21.73■■□□□ 1.07
SAMM50-201ENST00000350028 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.72■■□□□ 1.07
SAMM50-201ENST00000350028 MYH16Q9H6N6 1097 aa21.71■■□□□ 1.07
SAMM50-201ENST00000350028 POLKQ9UBT6 870 aa21.71■■□□□ 1.07
SAMM50-201ENST00000350028 DIP2AQ14689 1571 aa21.71■■□□□ 1.07
SAMM50-201ENST00000350028 PRR36Q9H6K5 1346 aa21.7■■□□□ 1.06
SAMM50-201ENST00000350028 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
SAMM50-201ENST00000350028 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
SAMM50-201ENST00000350028 AATKQ6ZMQ8 1374 aa21.7■■□□□ 1.06
SAMM50-201ENST00000350028 PTPRUQ92729 1446 aa21.7■■□□□ 1.06
SAMM50-201ENST00000350028 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
SAMM50-201ENST00000350028 MAP2P11137 1827 aaKnown RBP21.69■■□□□ 1.06
SAMM50-201ENST00000350028 BCAR3O75815 825 aa21.69■■□□□ 1.06
SAMM50-201ENST00000350028 TMPOP42166 694 aaKnown RBP21.69■■□□□ 1.06
SAMM50-201ENST00000350028 NME9Q86XW9 330 aa21.68■■□□□ 1.06
SAMM50-201ENST00000350028 FCHSD2O94868 740 aa21.67■■□□□ 1.06
SAMM50-201ENST00000350028 COG3Q96JB2 828 aa21.67■■□□□ 1.06
SAMM50-201ENST00000350028 TOPAZ1Q8N9V7 1692 aa21.67■■□□□ 1.06
SAMM50-201ENST00000350028 NCKAP5LQ9HCH0 1330 aa21.66■■□□□ 1.06
SAMM50-201ENST00000350028 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
SAMM50-201ENST00000350028 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
SAMM50-201ENST00000350028 PDE3AQ14432 1141 aa21.66■■□□□ 1.06
SAMM50-201ENST00000350028 AMOTL2Q9Y2J4 779 aa21.66■■□□□ 1.06
SAMM50-201ENST00000350028 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
SAMM50-201ENST00000350028 IL16Q14005 1332 aa21.64■■□□□ 1.06
SAMM50-201ENST00000350028 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.05
SAMM50-201ENST00000350028 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
SAMM50-201ENST00000350028 CT47B1P0C2W7 299 aaPredicted RBP21.63■■□□□ 1.05
SAMM50-201ENST00000350028 RARSP54136 660 aaKnown RBP21.63■■□□□ 1.05
SAMM50-201ENST00000350028 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
SAMM50-201ENST00000350028 TRIM35Q9UPQ4 493 aa21.62■■□□□ 1.05
SAMM50-201ENST00000350028 NEFMP07197 916 aa21.61■■□□□ 1.05
SAMM50-201ENST00000350028 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
SAMM50-201ENST00000350028 FBLN1P23142 703 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 CENPQQ7L2Z9 268 aaPredicted RBP21.6■■□□□ 1.05
SAMM50-201ENST00000350028 ACEP12821 1306 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 TTC21BQ7Z4L5 1316 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 NRKQ7Z2Y5 1582 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 MS4A1P11836 297 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 RIPK4P57078 832 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 EMILIN1Q9Y6C2 1016 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 PIK3R4Q99570 1358 aa21.6■■□□□ 1.05
SAMM50-201ENST00000350028 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
SAMM50-201ENST00000350028 LRRC7Q96NW7 1537 aa21.59■■□□□ 1.05
SAMM50-201ENST00000350028 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
SAMM50-201ENST00000350028 XRN1Q8IZH2 1706 aaKnown RBP21.58■■□□□ 1.05
SAMM50-201ENST00000350028 IL13P35225 146 aa21.58■■□□□ 1.05
SAMM50-201ENST00000350028 HSPA2P54652 639 aa21.58■■□□□ 1.04
SAMM50-201ENST00000350028 USP6P35125 1406 aa21.57■■□□□ 1.04
SAMM50-201ENST00000350028 PRKAR2BP31323 418 aa21.57■■□□□ 1.04
SAMM50-201ENST00000350028 AAMPQ13685 434 aa21.55■■□□□ 1.04
SAMM50-201ENST00000350028 ANKLE2Q86XL3 938 aa21.54■■□□□ 1.04
SAMM50-201ENST00000350028 OVOS2A0A0J9YW53 1432 aa21.53■■□□□ 1.04
SAMM50-201ENST00000350028 OVOS2Q6IE36 1432 aa21.53■■□□□ 1.04
SAMM50-201ENST00000350028 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
SAMM50-201ENST00000350028 TTC21AQ8NDW8 1320 aa21.53■■□□□ 1.04
SAMM50-201ENST00000350028 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
SAMM50-201ENST00000350028 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
SAMM50-201ENST00000350028 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
SAMM50-201ENST00000350028 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.03
SAMM50-201ENST00000350028 EXOSC9Q06265 439 aaKnown RBP21.51■■□□□ 1.03
SAMM50-201ENST00000350028 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
SAMM50-201ENST00000350028 ANKARQ7Z5J8 1434 aa21.51■■□□□ 1.03
SAMM50-201ENST00000350028 NALCNQ8IZF0 1738 aa21.5■■□□□ 1.03
SAMM50-201ENST00000350028 HMOX1P09601 288 aa21.5■■□□□ 1.03
SAMM50-201ENST00000350028 CALD1Q05682 793 aaKnown RBP21.5■■□□□ 1.03
SAMM50-201ENST00000350028 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
SAMM50-201ENST00000350028 USP31Q70CQ4 1352 aa21.5■■□□□ 1.03
SAMM50-201ENST00000350028 COG6Q9Y2V7 657 aa21.49■■□□□ 1.03
SAMM50-201ENST00000350028 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
SAMM50-201ENST00000350028 KCNA6P17658 529 aa21.48■■□□□ 1.03
SAMM50-201ENST00000350028 CLUAP1Q96AJ1 413 aa21.48■■□□□ 1.03
SAMM50-201ENST00000350028 PHACTR3Q96KR7 559 aa21.48■■□□□ 1.03
SAMM50-201ENST00000350028 NPHP4O75161 1426 aaPredicted RBP21.47■■□□□ 1.03
SAMM50-201ENST00000350028 PDE4AP27815 886 aa21.46■■□□□ 1.03
SAMM50-201ENST00000350028 LMOD3Q0VAK6 560 aa21.46■■□□□ 1.03
SAMM50-201ENST00000350028 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
SAMM50-201ENST00000350028 NGDNQ8NEJ9 315 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms