RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
UBA3-201ENST00000349511 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
UBA3-201ENST00000349511 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
UBA3-201ENST00000349511 MSH5O43196 834 aa17.79■□□□□ 0.44
UBA3-201ENST00000349511 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
UBA3-201ENST00000349511 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
UBA3-201ENST00000349511 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
UBA3-201ENST00000349511 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
UBA3-201ENST00000349511 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.44
UBA3-201ENST00000349511 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.43
UBA3-201ENST00000349511 SMG6Q86US8 1419 aaKnown RBP17.76■□□□□ 0.43
UBA3-201ENST00000349511 TTC21BQ7Z4L5 1316 aa17.76■□□□□ 0.43
UBA3-201ENST00000349511 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
UBA3-201ENST00000349511 ADGRL3Q9HAR2 1447 aa17.75■□□□□ 0.43
UBA3-201ENST00000349511 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
UBA3-201ENST00000349511 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
UBA3-201ENST00000349511 USP6P35125 1406 aa17.75■□□□□ 0.43
UBA3-201ENST00000349511 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
UBA3-201ENST00000349511 STRCP1A6NGW2 1772 aa17.74■□□□□ 0.43
UBA3-201ENST00000349511 SOX12O15370 315 aa17.74■□□□□ 0.43
UBA3-201ENST00000349511 COG3Q96JB2 828 aa17.74■□□□□ 0.43
UBA3-201ENST00000349511 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
UBA3-201ENST00000349511 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
UBA3-201ENST00000349511 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
UBA3-201ENST00000349511 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
UBA3-201ENST00000349511 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
UBA3-201ENST00000349511 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
UBA3-201ENST00000349511 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
UBA3-201ENST00000349511 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
UBA3-201ENST00000349511 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
UBA3-201ENST00000349511 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
UBA3-201ENST00000349511 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
UBA3-201ENST00000349511 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
UBA3-201ENST00000349511 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
UBA3-201ENST00000349511 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
UBA3-201ENST00000349511 MAP2P11137 1827 aaKnown RBP17.71■□□□□ 0.43
UBA3-201ENST00000349511 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
UBA3-201ENST00000349511 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
UBA3-201ENST00000349511 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
UBA3-201ENST00000349511 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
UBA3-201ENST00000349511 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
UBA3-201ENST00000349511 ZNF335Q9H4Z2 1342 aaPredicted RBP17.68■□□□□ 0.42
UBA3-201ENST00000349511 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
UBA3-201ENST00000349511 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBA3-201ENST00000349511 APAF1O14727 1248 aa17.68■□□□□ 0.42
UBA3-201ENST00000349511 FOXO3O43524 673 aa17.68■□□□□ 0.42
UBA3-201ENST00000349511 RNF123Q5XPI4 1314 aa17.67■□□□□ 0.42
UBA3-201ENST00000349511 SSH2Q76I76 1423 aa17.67■□□□□ 0.42
UBA3-201ENST00000349511 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
UBA3-201ENST00000349511 PSME1Q06323 249 aa17.66■□□□□ 0.42
UBA3-201ENST00000349511 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
UBA3-201ENST00000349511 ATF3P18847 181 aa17.65■□□□□ 0.42
UBA3-201ENST00000349511 NLRP6P59044 892 aa17.65■□□□□ 0.42
UBA3-201ENST00000349511 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
UBA3-201ENST00000349511 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
UBA3-201ENST00000349511 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
UBA3-201ENST00000349511 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
UBA3-201ENST00000349511 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
UBA3-201ENST00000349511 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
UBA3-201ENST00000349511 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
UBA3-201ENST00000349511 INSRP06213 1382 aa17.63■□□□□ 0.41
UBA3-201ENST00000349511 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
UBA3-201ENST00000349511 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
UBA3-201ENST00000349511 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
UBA3-201ENST00000349511 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
UBA3-201ENST00000349511 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
UBA3-201ENST00000349511 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
UBA3-201ENST00000349511 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
UBA3-201ENST00000349511 C1orf167Q5SNV9 1468 aa17.6■□□□□ 0.41
UBA3-201ENST00000349511 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
UBA3-201ENST00000349511 HMOX1P09601 288 aa17.59■□□□□ 0.41
UBA3-201ENST00000349511 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
UBA3-201ENST00000349511 MSH6P52701 1360 aa17.58■□□□□ 0.4
UBA3-201ENST00000349511 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
UBA3-201ENST00000349511 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
UBA3-201ENST00000349511 CADPS2Q86UW7 1296 aa17.57■□□□□ 0.4
UBA3-201ENST00000349511 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
UBA3-201ENST00000349511 MST1RQ04912 1400 aa17.57■□□□□ 0.4
UBA3-201ENST00000349511 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
UBA3-201ENST00000349511 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
UBA3-201ENST00000349511 LRRC7Q96NW7 1537 aa17.56■□□□□ 0.4
UBA3-201ENST00000349511 IL13P35225 146 aa17.56■□□□□ 0.4
UBA3-201ENST00000349511 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
UBA3-201ENST00000349511 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
UBA3-201ENST00000349511 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
UBA3-201ENST00000349511 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
UBA3-201ENST00000349511 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
UBA3-201ENST00000349511 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
UBA3-201ENST00000349511 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
UBA3-201ENST00000349511 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
UBA3-201ENST00000349511 NCOA3Q9Y6Q9 1424 aa17.53■□□□□ 0.4
UBA3-201ENST00000349511 AMPHP49418 695 aa17.53■□□□□ 0.4
UBA3-201ENST00000349511 EIF4A2Q14240 407 aaKnown RBP17.53■□□□□ 0.4
UBA3-201ENST00000349511 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
UBA3-201ENST00000349511 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
UBA3-201ENST00000349511 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
UBA3-201ENST00000349511 PRKAR2BP31323 418 aa17.52■□□□□ 0.4
UBA3-201ENST00000349511 WWC1Q8IX03 1113 aa17.52■□□□□ 0.4
UBA3-201ENST00000349511 DCCP43146 1447 aa17.51■□□□□ 0.39
UBA3-201ENST00000349511 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms