RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PLEKHF1Q96S99 279 aa18.37■□□□□ 0.53
SMTN-202ENST00000347557 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
SMTN-202ENST00000347557 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
SMTN-202ENST00000347557 QRICH2Q9H0J4 1663 aa18.37■□□□□ 0.53
SMTN-202ENST00000347557 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
SMTN-202ENST00000347557 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
SMTN-202ENST00000347557 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
SMTN-202ENST00000347557 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
SMTN-202ENST00000347557 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
SMTN-202ENST00000347557 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
SMTN-202ENST00000347557 IPO8O15397 1037 aaKnown RBP18.35■□□□□ 0.53
SMTN-202ENST00000347557 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
SMTN-202ENST00000347557 HSP90AA1P07900 732 aaKnown RBP18.35■□□□□ 0.53
SMTN-202ENST00000347557 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
SMTN-202ENST00000347557 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
SMTN-202ENST00000347557 MCM4P33991 863 aa18.34■□□□□ 0.53
SMTN-202ENST00000347557 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
SMTN-202ENST00000347557 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
SMTN-202ENST00000347557 CHMP5Q9NZZ3 219 aa18.32■□□□□ 0.52
SMTN-202ENST00000347557 GOLGA6L3A6NEY3 463 aa18.32■□□□□ 0.52
SMTN-202ENST00000347557 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
SMTN-202ENST00000347557 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
SMTN-202ENST00000347557 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
SMTN-202ENST00000347557 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
SMTN-202ENST00000347557 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
SMTN-202ENST00000347557 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
SMTN-202ENST00000347557 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
SMTN-202ENST00000347557 NSD2O96028 1365 aa18.3■□□□□ 0.52
SMTN-202ENST00000347557 PANK2Q9BZ23 570 aa18.3■□□□□ 0.52
SMTN-202ENST00000347557 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
SMTN-202ENST00000347557 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
SMTN-202ENST00000347557 TRAK2O60296 914 aa18.29■□□□□ 0.52
SMTN-202ENST00000347557 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
SMTN-202ENST00000347557 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
SMTN-202ENST00000347557 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
SMTN-202ENST00000347557 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
SMTN-202ENST00000347557 ABCC11Q96J66 1382 aa18.28■□□□□ 0.52
SMTN-202ENST00000347557 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
SMTN-202ENST00000347557 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
SMTN-202ENST00000347557 GLI2P10070 1586 aa18.27■□□□□ 0.52
SMTN-202ENST00000347557 APBB1O00213 710 aa18.27■□□□□ 0.52
SMTN-202ENST00000347557 FAM43AQ8N2R8 423 aa18.27■□□□□ 0.52
SMTN-202ENST00000347557 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
SMTN-202ENST00000347557 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
SMTN-202ENST00000347557 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.51
SMTN-202ENST00000347557 MLECQ14165 292 aa18.27■□□□□ 0.51
SMTN-202ENST00000347557 XRCC6P12956 609 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMTN-202ENST00000347557 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
SMTN-202ENST00000347557 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
SMTN-202ENST00000347557 NUCB1Q02818 461 aa18.25■□□□□ 0.51
SMTN-202ENST00000347557 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
SMTN-202ENST00000347557 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
SMTN-202ENST00000347557 RRAGDQ9NQL2 400 aaPredicted RBP18.25■□□□□ 0.51
SMTN-202ENST00000347557 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
SMTN-202ENST00000347557 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 PPLO60437 1756 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 FCHSD2O94868 740 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 ABCC3O15438 1527 aa18.24■□□□□ 0.51
SMTN-202ENST00000347557 A0A0U1RQG5 324 aaPredicted RBP18.23■□□□□ 0.51
SMTN-202ENST00000347557 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
SMTN-202ENST00000347557 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
SMTN-202ENST00000347557 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
SMTN-202ENST00000347557 VIRMAQ69YN4 1812 aaKnown RBP18.22■□□□□ 0.51
SMTN-202ENST00000347557 SOX12O15370 315 aa18.22■□□□□ 0.51
SMTN-202ENST00000347557 NME9Q86XW9 330 aa18.22■□□□□ 0.51
SMTN-202ENST00000347557 IL16Q14005 1332 aa18.22■□□□□ 0.51
SMTN-202ENST00000347557 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
SMTN-202ENST00000347557 FRMPD1Q5SYB0 1578 aa18.21■□□□□ 0.51
SMTN-202ENST00000347557 VAMP4O75379 141 aa18.2■□□□□ 0.5
SMTN-202ENST00000347557 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
SMTN-202ENST00000347557 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
SMTN-202ENST00000347557 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
SMTN-202ENST00000347557 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
SMTN-202ENST00000347557 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
SMTN-202ENST00000347557 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
SMTN-202ENST00000347557 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
SMTN-202ENST00000347557 CAMSAP1Q5T5Y3 1602 aa18.19■□□□□ 0.5
SMTN-202ENST00000347557 CD2BP2O95400 341 aaKnown RBP18.18■□□□□ 0.5
SMTN-202ENST00000347557 TNPO1Q92973 898 aaKnown RBP18.18■□□□□ 0.5
SMTN-202ENST00000347557 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
SMTN-202ENST00000347557 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
SMTN-202ENST00000347557 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
SMTN-202ENST00000347557 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
SMTN-202ENST00000347557 TBC1D9Q6ZT07 1266 aa18.18■□□□□ 0.5
SMTN-202ENST00000347557 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
SMTN-202ENST00000347557 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
SMTN-202ENST00000347557 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
SMTN-202ENST00000347557 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 GNAI1P63096 354 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 FGD1P98174 961 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 YEATS2Q9ULM3 1422 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 KRT24Q2M2I5 525 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 TXNDC2Q86VQ3 553 aa18.16■□□□□ 0.5
SMTN-202ENST00000347557 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
SMTN-202ENST00000347557 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
SMTN-202ENST00000347557 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
SMTN-202ENST00000347557 ARHGEF28Q8N1W1 1705 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms