RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
TUBD1-203ENST00000346141 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
TUBD1-203ENST00000346141 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
TUBD1-203ENST00000346141 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
TUBD1-203ENST00000346141 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
TUBD1-203ENST00000346141 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
TUBD1-203ENST00000346141 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
TUBD1-203ENST00000346141 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
TUBD1-203ENST00000346141 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
TUBD1-203ENST00000346141 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
TUBD1-203ENST00000346141 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
TUBD1-203ENST00000346141 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
TUBD1-203ENST00000346141 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
TUBD1-203ENST00000346141 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TUBD1-203ENST00000346141 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
TUBD1-203ENST00000346141 ATAD2Q6PL18 1390 aa17.1■□□□□ 0.33
TUBD1-203ENST00000346141 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
TUBD1-203ENST00000346141 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
TUBD1-203ENST00000346141 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
TUBD1-203ENST00000346141 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
TUBD1-203ENST00000346141 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
TUBD1-203ENST00000346141 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
TUBD1-203ENST00000346141 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
TUBD1-203ENST00000346141 VPS72Q15906 364 aa17.06■□□□□ 0.32
TUBD1-203ENST00000346141 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
TUBD1-203ENST00000346141 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
TUBD1-203ENST00000346141 SRPK2P78362 688 aaKnown RBP17.05■□□□□ 0.32
TUBD1-203ENST00000346141 ACEP12821 1306 aa17.05■□□□□ 0.32
TUBD1-203ENST00000346141 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
TUBD1-203ENST00000346141 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
TUBD1-203ENST00000346141 GLI3P10071 1580 aa17.05■□□□□ 0.32
TUBD1-203ENST00000346141 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
TUBD1-203ENST00000346141 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
TUBD1-203ENST00000346141 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.32
TUBD1-203ENST00000346141 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
TUBD1-203ENST00000346141 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.32
TUBD1-203ENST00000346141 EP400Q96L91 3159 aa17.02■□□□□ 0.31
TUBD1-203ENST00000346141 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
TUBD1-203ENST00000346141 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
TUBD1-203ENST00000346141 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
TUBD1-203ENST00000346141 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
TUBD1-203ENST00000346141 BRD4O60885 1362 aaPredicted RBP17■□□□□ 0.31
TUBD1-203ENST00000346141 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
TUBD1-203ENST00000346141 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
TUBD1-203ENST00000346141 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
TUBD1-203ENST00000346141 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
TUBD1-203ENST00000346141 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
TUBD1-203ENST00000346141 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
TUBD1-203ENST00000346141 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
TUBD1-203ENST00000346141 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
TUBD1-203ENST00000346141 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
TUBD1-203ENST00000346141 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
TUBD1-203ENST00000346141 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
TUBD1-203ENST00000346141 DSG3P32926 999 aa16.97■□□□□ 0.31
TUBD1-203ENST00000346141 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
TUBD1-203ENST00000346141 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
TUBD1-203ENST00000346141 CABP1Q9NZU7 370 aa16.96■□□□□ 0.31
TUBD1-203ENST00000346141 USP19O94966 1318 aa16.95■□□□□ 0.3
TUBD1-203ENST00000346141 USP6P35125 1406 aa16.95■□□□□ 0.3
TUBD1-203ENST00000346141 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
TUBD1-203ENST00000346141 SPATA31A5Q5VU36 1347 aa16.94■□□□□ 0.3
TUBD1-203ENST00000346141 SPATA31A7Q8IWB4 1347 aa16.94■□□□□ 0.3
TUBD1-203ENST00000346141 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
TUBD1-203ENST00000346141 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 NRKQ7Z2Y5 1582 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 A0A0G2JS52 829 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 MYT1Q01538 1121 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
TUBD1-203ENST00000346141 KRT27Q7Z3Y8 459 aa16.93■□□□□ 0.3
TUBD1-203ENST00000346141 CPDO75976 1380 aa16.92■□□□□ 0.3
TUBD1-203ENST00000346141 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
TUBD1-203ENST00000346141 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
TUBD1-203ENST00000346141 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
TUBD1-203ENST00000346141 SSH2Q76I76 1423 aa16.9■□□□□ 0.3
TUBD1-203ENST00000346141 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
TUBD1-203ENST00000346141 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
TUBD1-203ENST00000346141 GCP02774 474 aa16.89■□□□□ 0.29
TUBD1-203ENST00000346141 ABCB7O75027 752 aa16.88■□□□□ 0.29
TUBD1-203ENST00000346141 NLRP6P59044 892 aa16.88■□□□□ 0.29
TUBD1-203ENST00000346141 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
TUBD1-203ENST00000346141 EVA1CP58658 441 aa16.86■□□□□ 0.29
TUBD1-203ENST00000346141 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
TUBD1-203ENST00000346141 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
TUBD1-203ENST00000346141 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
TUBD1-203ENST00000346141 SLIT3O75094 1523 aa16.85■□□□□ 0.29
TUBD1-203ENST00000346141 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
TUBD1-203ENST00000346141 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
TUBD1-203ENST00000346141 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
TUBD1-203ENST00000346141 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
TUBD1-203ENST00000346141 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
TUBD1-203ENST00000346141 PIK3C2AO00443 1686 aa16.84■□□□□ 0.29
TUBD1-203ENST00000346141 AKAP12Q02952 1782 aa16.83■□□□□ 0.29
TUBD1-203ENST00000346141 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.29
TUBD1-203ENST00000346141 ATXN8OSP0DMR3 200 aa16.83■□□□□ 0.28
TUBD1-203ENST00000346141 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
TUBD1-203ENST00000346141 AATKQ6ZMQ8 1374 aa16.82■□□□□ 0.28
TUBD1-203ENST00000346141 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
TUBD1-203ENST00000346141 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
TUBD1-203ENST00000346141 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms