RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
SPO11-201ENST00000345868 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
SPO11-201ENST00000345868 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
SPO11-201ENST00000345868 KIF20BQ96Q89 1820 aa17.34■□□□□ 0.37
SPO11-201ENST00000345868 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
SPO11-201ENST00000345868 CFAP53Q96M91 514 aa17.33■□□□□ 0.37
SPO11-201ENST00000345868 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.37
SPO11-201ENST00000345868 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
SPO11-201ENST00000345868 COG3Q96JB2 828 aa17.32■□□□□ 0.36
SPO11-201ENST00000345868 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
SPO11-201ENST00000345868 STRCQ7RTU9 1775 aa17.3■□□□□ 0.36
SPO11-201ENST00000345868 C19orf44Q9H6X5 657 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 TTC21AQ8NDW8 1320 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
SPO11-201ENST00000345868 POLKQ9UBT6 870 aa17.28■□□□□ 0.36
SPO11-201ENST00000345868 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
SPO11-201ENST00000345868 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.36
SPO11-201ENST00000345868 FBLN1P23142 703 aa17.27■□□□□ 0.36
SPO11-201ENST00000345868 ESCO1Q5FWF5 840 aa17.27■□□□□ 0.36
SPO11-201ENST00000345868 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
SPO11-201ENST00000345868 RGPD8O14715 1765 aaPredicted RBP17.26■□□□□ 0.35
SPO11-201ENST00000345868 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
SPO11-201ENST00000345868 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
SPO11-201ENST00000345868 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
SPO11-201ENST00000345868 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
SPO11-201ENST00000345868 DCCP43146 1447 aa17.24■□□□□ 0.35
SPO11-201ENST00000345868 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
SPO11-201ENST00000345868 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
SPO11-201ENST00000345868 ORAI2Q96SN7 254 aa17.23■□□□□ 0.35
SPO11-201ENST00000345868 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
SPO11-201ENST00000345868 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
SPO11-201ENST00000345868 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
SPO11-201ENST00000345868 ATF3P18847 181 aa17.22■□□□□ 0.35
SPO11-201ENST00000345868 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
SPO11-201ENST00000345868 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
SPO11-201ENST00000345868 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
SPO11-201ENST00000345868 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
SPO11-201ENST00000345868 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.34
SPO11-201ENST00000345868 MST1RQ04912 1400 aa17.2■□□□□ 0.34
SPO11-201ENST00000345868 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
SPO11-201ENST00000345868 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
SPO11-201ENST00000345868 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
SPO11-201ENST00000345868 APAF1O14727 1248 aa17.2■□□□□ 0.34
SPO11-201ENST00000345868 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
SPO11-201ENST00000345868 PSME1Q06323 249 aa17.2■□□□□ 0.34
SPO11-201ENST00000345868 MSH6P52701 1360 aa17.19■□□□□ 0.34
SPO11-201ENST00000345868 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
SPO11-201ENST00000345868 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
SPO11-201ENST00000345868 NLRP6P59044 892 aa17.19■□□□□ 0.34
SPO11-201ENST00000345868 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
SPO11-201ENST00000345868 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
SPO11-201ENST00000345868 FOXO3O43524 673 aa17.18■□□□□ 0.34
SPO11-201ENST00000345868 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
SPO11-201ENST00000345868 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
SPO11-201ENST00000345868 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
SPO11-201ENST00000345868 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
SPO11-201ENST00000345868 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
SPO11-201ENST00000345868 SOX12O15370 315 aa17.16■□□□□ 0.34
SPO11-201ENST00000345868 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
SPO11-201ENST00000345868 IL13P35225 146 aa17.15■□□□□ 0.34
SPO11-201ENST00000345868 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
SPO11-201ENST00000345868 CDCA7LQ96GN5 454 aa17.14■□□□□ 0.33
SPO11-201ENST00000345868 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
SPO11-201ENST00000345868 XPCQ01831 940 aaPredicted RBP17.13■□□□□ 0.33
SPO11-201ENST00000345868 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
SPO11-201ENST00000345868 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
SPO11-201ENST00000345868 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
SPO11-201ENST00000345868 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
SPO11-201ENST00000345868 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
SPO11-201ENST00000345868 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
SPO11-201ENST00000345868 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
SPO11-201ENST00000345868 FCHSD2O94868 740 aa17.1■□□□□ 0.33
SPO11-201ENST00000345868 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
SPO11-201ENST00000345868 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
SPO11-201ENST00000345868 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
SPO11-201ENST00000345868 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
SPO11-201ENST00000345868 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
SPO11-201ENST00000345868 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
SPO11-201ENST00000345868 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
SPO11-201ENST00000345868 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
SPO11-201ENST00000345868 FLT4P35916 1363 aa17.1■□□□□ 0.33
SPO11-201ENST00000345868 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
SPO11-201ENST00000345868 AMPHP49418 695 aa17.08■□□□□ 0.32
SPO11-201ENST00000345868 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
SPO11-201ENST00000345868 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
SPO11-201ENST00000345868 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
SPO11-201ENST00000345868 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
SPO11-201ENST00000345868 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
SPO11-201ENST00000345868 NEFLP07196 543 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 HMOX1P09601 288 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
SPO11-201ENST00000345868 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms