RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ANXA1P04083 346 aa16.74■□□□□ 0.27
CASC4-202ENST00000345795 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
CASC4-202ENST00000345795 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
CASC4-202ENST00000345795 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.74■□□□□ 0.27
CASC4-202ENST00000345795 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
CASC4-202ENST00000345795 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
CASC4-202ENST00000345795 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
CASC4-202ENST00000345795 LTKP29376 864 aa16.73■□□□□ 0.27
CASC4-202ENST00000345795 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
CASC4-202ENST00000345795 TRIM6-TRIM34B2RNG4 842 aa16.72■□□□□ 0.27
CASC4-202ENST00000345795 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
CASC4-202ENST00000345795 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
CASC4-202ENST00000345795 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.27
CASC4-202ENST00000345795 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
CASC4-202ENST00000345795 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
CASC4-202ENST00000345795 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
CASC4-202ENST00000345795 DDX19BQ9UMR2 479 aa16.71■□□□□ 0.27
CASC4-202ENST00000345795 SMARCA5O60264 1052 aaPredicted RBP16.7■□□□□ 0.26
CASC4-202ENST00000345795 MS4A1P11836 297 aa16.69■□□□□ 0.26
CASC4-202ENST00000345795 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
CASC4-202ENST00000345795 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
CASC4-202ENST00000345795 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
CASC4-202ENST00000345795 PTPRTO14522 1441 aa16.69■□□□□ 0.26
CASC4-202ENST00000345795 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
CASC4-202ENST00000345795 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 GNAI1P63096 354 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 WDR63Q8IWG1 891 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 ZFYVE16Q7Z3T8 1539 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
CASC4-202ENST00000345795 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
CASC4-202ENST00000345795 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
CASC4-202ENST00000345795 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
CASC4-202ENST00000345795 KCNA6P17658 529 aa16.67■□□□□ 0.26
CASC4-202ENST00000345795 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
CASC4-202ENST00000345795 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
CASC4-202ENST00000345795 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
CASC4-202ENST00000345795 MAP4K4O95819 1239 aaPredicted RBP16.66■□□□□ 0.26
CASC4-202ENST00000345795 TEFQ10587 303 aa16.66■□□□□ 0.26
CASC4-202ENST00000345795 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
CASC4-202ENST00000345795 FCHSD2O94868 740 aa16.65■□□□□ 0.26
CASC4-202ENST00000345795 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
CASC4-202ENST00000345795 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
CASC4-202ENST00000345795 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
CASC4-202ENST00000345795 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
CASC4-202ENST00000345795 METP08581 1390 aa16.65■□□□□ 0.26
CASC4-202ENST00000345795 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.26
CASC4-202ENST00000345795 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.26
CASC4-202ENST00000345795 NFKBIBQ15653 356 aa16.64■□□□□ 0.26
CASC4-202ENST00000345795 THEMISQ8N1K5 641 aaPredicted RBP16.64■□□□□ 0.26
CASC4-202ENST00000345795 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
CASC4-202ENST00000345795 HSPA2P54652 639 aa16.63■□□□□ 0.25
CASC4-202ENST00000345795 EXOC6BQ9Y2D4 811 aa16.63■□□□□ 0.25
CASC4-202ENST00000345795 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
CASC4-202ENST00000345795 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
CASC4-202ENST00000345795 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
CASC4-202ENST00000345795 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
CASC4-202ENST00000345795 DTNBO60941 627 aa16.62■□□□□ 0.25
CASC4-202ENST00000345795 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
CASC4-202ENST00000345795 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
CASC4-202ENST00000345795 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
CASC4-202ENST00000345795 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
CASC4-202ENST00000345795 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
CASC4-202ENST00000345795 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
CASC4-202ENST00000345795 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
CASC4-202ENST00000345795 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
CASC4-202ENST00000345795 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
CASC4-202ENST00000345795 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
CASC4-202ENST00000345795 TNRQ92752 1358 aa16.6■□□□□ 0.25
CASC4-202ENST00000345795 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
CASC4-202ENST00000345795 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
CASC4-202ENST00000345795 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
CASC4-202ENST00000345795 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
CASC4-202ENST00000345795 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
CASC4-202ENST00000345795 STRN4Q9NRL3 753 aa16.57■□□□□ 0.24
CASC4-202ENST00000345795 MYL6BP14649 208 aa16.57■□□□□ 0.24
CASC4-202ENST00000345795 KCNJ4P48050 445 aa16.57■□□□□ 0.24
CASC4-202ENST00000345795 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
CASC4-202ENST00000345795 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
CASC4-202ENST00000345795 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
CASC4-202ENST00000345795 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
CASC4-202ENST00000345795 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
CASC4-202ENST00000345795 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
CASC4-202ENST00000345795 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
CASC4-202ENST00000345795 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
CASC4-202ENST00000345795 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 E9PCH4 1651 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 TRPM2O94759 1503 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
CASC4-202ENST00000345795 MEIS3Q99687 375 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
CASC4-202ENST00000345795 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
CASC4-202ENST00000345795 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
CASC4-202ENST00000345795 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
CASC4-202ENST00000345795 G2E3Q7L622 706 aa16.54■□□□□ 0.24
CASC4-202ENST00000345795 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
CASC4-202ENST00000345795 SIL1Q9H173 461 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms