RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ATP7BP35670 1465 aa16.46■□□□□ 0.23
SNCA-202ENST00000345009 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
SNCA-202ENST00000345009 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
SNCA-202ENST00000345009 DDX17Q92841 729 aaKnown RBP16.45■□□□□ 0.22
SNCA-202ENST00000345009 KIF1AQ12756 1690 aa16.44■□□□□ 0.22
SNCA-202ENST00000345009 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
SNCA-202ENST00000345009 AHDC1Q5TGY3 1603 aaPredicted RBP16.44■□□□□ 0.22
SNCA-202ENST00000345009 ACEP12821 1306 aa16.44■□□□□ 0.22
SNCA-202ENST00000345009 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
SNCA-202ENST00000345009 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
SNCA-202ENST00000345009 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
SNCA-202ENST00000345009 ITSN1Q15811 1721 aa16.42■□□□□ 0.22
SNCA-202ENST00000345009 JCADQ9P266 1359 aa16.42■□□□□ 0.22
SNCA-202ENST00000345009 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
SNCA-202ENST00000345009 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
SNCA-202ENST00000345009 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
SNCA-202ENST00000345009 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
SNCA-202ENST00000345009 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
SNCA-202ENST00000345009 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
SNCA-202ENST00000345009 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
SNCA-202ENST00000345009 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
SNCA-202ENST00000345009 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
SNCA-202ENST00000345009 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
SNCA-202ENST00000345009 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
SNCA-202ENST00000345009 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
SNCA-202ENST00000345009 NHSL1Q5SYE7 1610 aa16.38■□□□□ 0.21
SNCA-202ENST00000345009 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
SNCA-202ENST00000345009 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
SNCA-202ENST00000345009 PXDNQ92626 1479 aa16.36■□□□□ 0.21
SNCA-202ENST00000345009 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
SNCA-202ENST00000345009 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
SNCA-202ENST00000345009 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
SNCA-202ENST00000345009 ABTB2Q8N961 1025 aa16.35■□□□□ 0.21
SNCA-202ENST00000345009 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
SNCA-202ENST00000345009 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
SNCA-202ENST00000345009 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
SNCA-202ENST00000345009 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
SNCA-202ENST00000345009 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
SNCA-202ENST00000345009 PNPLA6Q8IY17 1366 aa16.33■□□□□ 0.2
SNCA-202ENST00000345009 USP6P35125 1406 aa16.33■□□□□ 0.2
SNCA-202ENST00000345009 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
SNCA-202ENST00000345009 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
SNCA-202ENST00000345009 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
SNCA-202ENST00000345009 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
SNCA-202ENST00000345009 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
SNCA-202ENST00000345009 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
SNCA-202ENST00000345009 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
SNCA-202ENST00000345009 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
SNCA-202ENST00000345009 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
SNCA-202ENST00000345009 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
SNCA-202ENST00000345009 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
SNCA-202ENST00000345009 NLRP6P59044 892 aa16.3■□□□□ 0.2
SNCA-202ENST00000345009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNCA-202ENST00000345009 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
SNCA-202ENST00000345009 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
SNCA-202ENST00000345009 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
SNCA-202ENST00000345009 NUTM2GQ5VZR2 741 aa16.27■□□□□ 0.2
SNCA-202ENST00000345009 PANK3Q9H999 370 aa16.27■□□□□ 0.2
SNCA-202ENST00000345009 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
SNCA-202ENST00000345009 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
SNCA-202ENST00000345009 CD163L1Q9NR16 1453 aa16.26■□□□□ 0.19
SNCA-202ENST00000345009 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
SNCA-202ENST00000345009 WASHC2AQ641Q2 1341 aa16.25■□□□□ 0.19
SNCA-202ENST00000345009 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
SNCA-202ENST00000345009 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
SNCA-202ENST00000345009 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
SNCA-202ENST00000345009 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
SNCA-202ENST00000345009 COG3Q96JB2 828 aa16.24■□□□□ 0.19
SNCA-202ENST00000345009 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
SNCA-202ENST00000345009 TRPM3Q9HCF6 1732 aaPredicted RBP16.24■□□□□ 0.19
SNCA-202ENST00000345009 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
SNCA-202ENST00000345009 NME9Q86XW9 330 aa16.23■□□□□ 0.19
SNCA-202ENST00000345009 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
SNCA-202ENST00000345009 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
SNCA-202ENST00000345009 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
SNCA-202ENST00000345009 COL22A1Q8NFW1 1626 aaPredicted RBP16.22■□□□□ 0.19
SNCA-202ENST00000345009 GCP02774 474 aa16.21■□□□□ 0.19
SNCA-202ENST00000345009 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
SNCA-202ENST00000345009 ALS2Q96Q42 1657 aa16.21■□□□□ 0.18
SNCA-202ENST00000345009 USP19O94966 1318 aa16.2■□□□□ 0.18
SNCA-202ENST00000345009 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
SNCA-202ENST00000345009 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
SNCA-202ENST00000345009 FYB1O15117 783 aa16.2■□□□□ 0.18
SNCA-202ENST00000345009 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
SNCA-202ENST00000345009 ZNF772Q68DY9 489 aaPredicted RBP16.19■□□□□ 0.18
SNCA-202ENST00000345009 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
SNCA-202ENST00000345009 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
SNCA-202ENST00000345009 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
SNCA-202ENST00000345009 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
SNCA-202ENST00000345009 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
SNCA-202ENST00000345009 MYOM1P52179 1685 aa16.16■□□□□ 0.18
SNCA-202ENST00000345009 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
SNCA-202ENST00000345009 SOX12O15370 315 aa16.16■□□□□ 0.18
SNCA-202ENST00000345009 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
SNCA-202ENST00000345009 LRP6O75581 1613 aa16.16■□□□□ 0.18
SNCA-202ENST00000345009 CPDO75976 1380 aa16.15■□□□□ 0.18
SNCA-202ENST00000345009 NSD2O96028 1365 aa16.15■□□□□ 0.18
SNCA-202ENST00000345009 FAM83GA6ND36 823 aa16.15■□□□□ 0.18
SNCA-202ENST00000345009 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
SNCA-202ENST00000345009 FNBP4Q8N3X1 1017 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms