RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 GZF1Q9H116 711 aaPredicted RBP20.03■□□□□ 0.8
CLCN2-202ENST00000344937 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
CLCN2-202ENST00000344937 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
CLCN2-202ENST00000344937 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
CLCN2-202ENST00000344937 NRXN3Q9Y4C0 1643 aa20■□□□□ 0.79
CLCN2-202ENST00000344937 UBR1Q8IWV7 1749 aa20■□□□□ 0.79
CLCN2-202ENST00000344937 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
CLCN2-202ENST00000344937 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
CLCN2-202ENST00000344937 WWC1Q8IX03 1113 aa19.99■□□□□ 0.79
CLCN2-202ENST00000344937 HDGFP51858 240 aaKnown RBP19.99■□□□□ 0.79
CLCN2-202ENST00000344937 C3P01024 1663 aa19.99■□□□□ 0.79
CLCN2-202ENST00000344937 RLBP1P12271 317 aa19.99■□□□□ 0.79
CLCN2-202ENST00000344937 SETD1AO15047 1707 aaKnown RBP19.98■□□□□ 0.79
CLCN2-202ENST00000344937 FER1L4A9Z1Z3 1794 aa19.98■□□□□ 0.79
CLCN2-202ENST00000344937 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
CLCN2-202ENST00000344937 A0A1W2PP64 1363 aa19.98■□□□□ 0.79
CLCN2-202ENST00000344937 NKTRP30414 1462 aaKnown RBP19.98■□□□□ 0.79
CLCN2-202ENST00000344937 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
CLCN2-202ENST00000344937 ANKRD36BQ8N2N9 1353 aa19.97■□□□□ 0.79
CLCN2-202ENST00000344937 USP19O94966 1318 aa19.97■□□□□ 0.79
CLCN2-202ENST00000344937 HSP90AA2PQ14568 343 aaPredicted RBP19.97■□□□□ 0.79
CLCN2-202ENST00000344937 CGNL1Q0VF96 1302 aa19.96■□□□□ 0.79
CLCN2-202ENST00000344937 PUS7Q96PZ0 661 aaKnown RBP19.95■□□□□ 0.78
CLCN2-202ENST00000344937 ABCC11Q96J66 1382 aa19.95■□□□□ 0.78
CLCN2-202ENST00000344937 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
CLCN2-202ENST00000344937 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
CLCN2-202ENST00000344937 BECN1Q14457 450 aa19.95■□□□□ 0.78
CLCN2-202ENST00000344937 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
CLCN2-202ENST00000344937 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
CLCN2-202ENST00000344937 UPF2Q9HAU5 1272 aaKnown RBP19.93■□□□□ 0.78
CLCN2-202ENST00000344937 NAP1L5Q96NT1 182 aaPredicted RBP19.93■□□□□ 0.78
CLCN2-202ENST00000344937 PDZRN3Q9UPQ7 1066 aa19.93■□□□□ 0.78
CLCN2-202ENST00000344937 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
CLCN2-202ENST00000344937 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
CLCN2-202ENST00000344937 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
CLCN2-202ENST00000344937 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
CLCN2-202ENST00000344937 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
CLCN2-202ENST00000344937 RRP9O43818 475 aaKnown RBP19.91■□□□□ 0.78
CLCN2-202ENST00000344937 MTHFSP49914 203 aa19.91■□□□□ 0.78
CLCN2-202ENST00000344937 MFAP1P55081 439 aaKnown RBP19.91■□□□□ 0.78
CLCN2-202ENST00000344937 TERF2IPQ9NYB0 399 aa19.9■□□□□ 0.78
CLCN2-202ENST00000344937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLCN2-202ENST00000344937 TSR2Q969E8 191 aaKnown RBP19.9■□□□□ 0.78
CLCN2-202ENST00000344937 U2AF1L5P0DN76 240 aaPredicted RBP19.89■□□□□ 0.78
CLCN2-202ENST00000344937 RARSP54136 660 aaKnown RBP19.89■□□□□ 0.78
CLCN2-202ENST00000344937 U2AF1Q01081 240 aaKnown RBP eCLIP19.89■□□□□ 0.78
CLCN2-202ENST00000344937 CD163L1Q9NR16 1453 aa19.89■□□□□ 0.77
CLCN2-202ENST00000344937 PDE3AQ14432 1141 aa19.89■□□□□ 0.77
CLCN2-202ENST00000344937 ROBO2Q9HCK4 1378 aa19.89■□□□□ 0.77
CLCN2-202ENST00000344937 WASLO00401 505 aaPredicted RBP19.89■□□□□ 0.77
CLCN2-202ENST00000344937 DLC1Q96QB1 1528 aa19.88■□□□□ 0.77
CLCN2-202ENST00000344937 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
CLCN2-202ENST00000344937 FYB1O15117 783 aa19.88■□□□□ 0.77
CLCN2-202ENST00000344937 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
CLCN2-202ENST00000344937 FBLN1P23142 703 aa19.87■□□□□ 0.77
CLCN2-202ENST00000344937 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
CLCN2-202ENST00000344937 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
CLCN2-202ENST00000344937 INSRP06213 1382 aa19.87■□□□□ 0.77
CLCN2-202ENST00000344937 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
CLCN2-202ENST00000344937 THEMISQ8N1K5 641 aaPredicted RBP19.87■□□□□ 0.77
CLCN2-202ENST00000344937 TBC1D2Q9BYX2 928 aa19.87■□□□□ 0.77
CLCN2-202ENST00000344937 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
CLCN2-202ENST00000344937 NUDT16Q96DE0 195 aaKnown RBP19.84■□□□□ 0.77
CLCN2-202ENST00000344937 NINLQ9Y2I6 1382 aa19.84■□□□□ 0.77
CLCN2-202ENST00000344937 RIMS1Q86UR5 1692 aaKnown RBP19.84■□□□□ 0.77
CLCN2-202ENST00000344937 PNNQ9H307 717 aaKnown RBP19.84■□□□□ 0.77
CLCN2-202ENST00000344937 PTPRUQ92729 1446 aa19.83■□□□□ 0.77
CLCN2-202ENST00000344937 RUNDC1Q96C34 613 aa19.83■□□□□ 0.76
CLCN2-202ENST00000344937 AMOTL2Q9Y2J4 779 aa19.83■□□□□ 0.76
CLCN2-202ENST00000344937 POLR3AO14802 1390 aaPredicted RBP19.82■□□□□ 0.76
CLCN2-202ENST00000344937 PMFBP1Q8TBY8 1022 aa19.82■□□□□ 0.76
CLCN2-202ENST00000344937 USP32Q8NFA0 1604 aa19.82■□□□□ 0.76
CLCN2-202ENST00000344937 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
CLCN2-202ENST00000344937 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
CLCN2-202ENST00000344937 ZRANB1Q9UGI0 708 aa19.81■□□□□ 0.76
CLCN2-202ENST00000344937 PRR36Q9H6K5 1346 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
CLCN2-202ENST00000344937 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 TECPR2O15040 1411 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 PANK2Q9BZ23 570 aa19.8■□□□□ 0.76
CLCN2-202ENST00000344937 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
CLCN2-202ENST00000344937 NSD2O96028 1365 aa19.79■□□□□ 0.76
CLCN2-202ENST00000344937 SLIT1O75093 1534 aa19.79■□□□□ 0.76
CLCN2-202ENST00000344937 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
CLCN2-202ENST00000344937 TBC1D32Q96NH3 1257 aa19.78■□□□□ 0.76
CLCN2-202ENST00000344937 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 MED14O60244 1454 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 CPS1P31327 1500 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 CLCN1P35523 988 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 L1TD1Q5T7N2 865 aaKnown RBP19.77■□□□□ 0.76
CLCN2-202ENST00000344937 NME9Q86XW9 330 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 CFAP53Q96M91 514 aa19.77■□□□□ 0.76
CLCN2-202ENST00000344937 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
CLCN2-202ENST00000344937 KNDC1Q76NI1 1749 aa19.76■□□□□ 0.75
CLCN2-202ENST00000344937 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
CLCN2-202ENST00000344937 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
CLCN2-202ENST00000344937 RBM33Q96EV2 1170 aaKnown RBP19.75■□□□□ 0.75
CLCN2-202ENST00000344937 SHPRHQ149N8 1683 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms