RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 RAB3GAP2Q9H2M9 1393 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 SMTNL1A8MU46 457 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 ANKRD1Q15327 319 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 DZIP1LQ8IYY4 767 aaKnown RBP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 IL27Q8NEV9 243 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 API5Q9BZZ5 524 aaKnown RBP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 VPS8Q8N3P4 1428 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 V9GYY5 206 aaPredicted RBP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 CASQ1P31415 396 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 CECR2Q9BXF3 1484 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 SART3Q15020 963 aaKnown RBP9.87□□□□□ -0.83
MCPH1-201ENST00000344683 KIF18AQ8NI77 898 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 WDR66Q8TBY9 1149 aa9.87□□□□□ -0.83
MCPH1-201ENST00000344683 ZNF397Q8NF99 534 aaPredicted RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 IVLP07476 585 aa9.86□□□□□ -0.83
MCPH1-201ENST00000344683 IMMTQ16891 758 aaKnown RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 WIZO95785 1651 aa9.86□□□□□ -0.83
MCPH1-201ENST00000344683 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
MCPH1-201ENST00000344683 SEPT6Q14141 434 aa9.86□□□□□ -0.83
MCPH1-201ENST00000344683 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 G3BP1Q13283 466 aaKnown RBP eCLIP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 WDR33Q9C0J8 1336 aaKnown RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
MCPH1-201ENST00000344683 SMC1AQ14683 1233 aaKnown RBP9.85□□□□□ -0.83
MCPH1-201ENST00000344683 SPECC1LQ69YQ0 1117 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 DNAAF4Q8WXU2 420 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
MCPH1-201ENST00000344683 VPS37DQ86XT2 251 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 DYNC1I1O14576 645 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 C6orf163Q5TEZ5 329 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
MCPH1-201ENST00000344683 CBX1P83916 185 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 EIF4G1Q04637 1599 aaKnown RBP9.84□□□□□ -0.83
MCPH1-201ENST00000344683 EPB41L2O43491 1005 aaKnown RBP9.84□□□□□ -0.83
MCPH1-201ENST00000344683 PLIN1O60240 522 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 IPO4Q8TEX9 1081 aaKnown RBP9.84□□□□□ -0.83
MCPH1-201ENST00000344683 FYB1O15117 783 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 CCDC175P0C221 793 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 AMPHP49418 695 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 MNAT1P51948 309 aa9.84□□□□□ -0.83
MCPH1-201ENST00000344683 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
MCPH1-201ENST00000344683 PKD2Q13563 968 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 SAFB2Q14151 953 aaKnown RBP eCLIP9.83□□□□□ -0.84
MCPH1-201ENST00000344683 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 FAM114A1Q8IWE2 563 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 TAF4BQ92750 862 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 MPHOSPH9Q99550 1183 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 CPSF2Q9P2I0 782 aaKnown RBP9.83□□□□□ -0.84
MCPH1-201ENST00000344683 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 MCM5P33992 734 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 SWAP70Q9UH65 585 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 KIF5CO60282 957 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 KRT85P78386 507 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 RNF187Q5TA31 235 aaPredicted RBP9.83□□□□□ -0.84
MCPH1-201ENST00000344683 DDX23Q9BUQ8 820 aaKnown RBP9.83□□□□□ -0.84
MCPH1-201ENST00000344683 STK26Q9P289 416 aa9.83□□□□□ -0.84
MCPH1-201ENST00000344683 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 CETN2P41208 172 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 DDX46Q7L014 1031 aaKnown RBP9.82□□□□□ -0.84
MCPH1-201ENST00000344683 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 RAD21O60216 631 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 FOSBP53539 338 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 ARHGAP29Q52LW3 1261 aa9.82□□□□□ -0.84
MCPH1-201ENST00000344683 SLC3A2P08195 630 aaKnown RBP9.81□□□□□ -0.84
MCPH1-201ENST00000344683 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
MCPH1-201ENST00000344683 FMNL2Q96PY5 1086 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 STK38Q15208 465 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 NEMFO60524 1076 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 IFFO1Q0D2I5 559 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
MCPH1-201ENST00000344683 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
MCPH1-201ENST00000344683 DHX37Q8IY37 1157 aaKnown RBP9.81□□□□□ -0.84
MCPH1-201ENST00000344683 HSPA4P34932 840 aa9.8□□□□□ -0.84
MCPH1-201ENST00000344683 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
MCPH1-201ENST00000344683 PRDM10Q9NQV6 1147 aa9.8□□□□□ -0.84
MCPH1-201ENST00000344683 K7ELQ4 463 aaPredicted RBP9.8□□□□□ -0.84
MCPH1-201ENST00000344683 TRIM21P19474 475 aaKnown RBP9.8□□□□□ -0.84
MCPH1-201ENST00000344683 CLGNO14967 610 aa9.8□□□□□ -0.84
MCPH1-201ENST00000344683 NAA15Q9BXJ9 866 aaKnown RBP9.8□□□□□ -0.84
MCPH1-201ENST00000344683 GTPBP4Q9BZE4 634 aaKnown RBP9.8□□□□□ -0.84
MCPH1-201ENST00000344683 PAXBP1Q9Y5B6 917 aa9.8□□□□□ -0.84
MCPH1-201ENST00000344683 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 KRT18P05783 430 aaKnown RBP9.79□□□□□ -0.84
MCPH1-201ENST00000344683 DDX12PQ92771 950 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
MCPH1-201ENST00000344683 DNAI2Q9GZS0 605 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 FIBPO43427 364 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
MCPH1-201ENST00000344683 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms