RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PAK3O75914 559 aaPredicted RBP17.9■□□□□ 0.46
SGCA-202ENST00000344627 BAG6P46379 1132 aa17.9■□□□□ 0.46
SGCA-202ENST00000344627 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
SGCA-202ENST00000344627 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
SGCA-202ENST00000344627 ALS2Q96Q42 1657 aa17.9■□□□□ 0.46
SGCA-202ENST00000344627 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
SGCA-202ENST00000344627 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
SGCA-202ENST00000344627 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
SGCA-202ENST00000344627 ARHGEF28Q8N1W1 1705 aaKnown RBP17.88■□□□□ 0.45
SGCA-202ENST00000344627 SPATA31A5Q5VU36 1347 aa17.88■□□□□ 0.45
SGCA-202ENST00000344627 SPATA31A7Q8IWB4 1347 aa17.88■□□□□ 0.45
SGCA-202ENST00000344627 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
SGCA-202ENST00000344627 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
SGCA-202ENST00000344627 A0A0G2JS52 829 aa17.87■□□□□ 0.45
SGCA-202ENST00000344627 MYT1Q01538 1121 aa17.87■□□□□ 0.45
SGCA-202ENST00000344627 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
SGCA-202ENST00000344627 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
SGCA-202ENST00000344627 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
SGCA-202ENST00000344627 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
SGCA-202ENST00000344627 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
SGCA-202ENST00000344627 NRAPQ86VF7 1730 aa17.84■□□□□ 0.45
SGCA-202ENST00000344627 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
SGCA-202ENST00000344627 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
SGCA-202ENST00000344627 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
SGCA-202ENST00000344627 DEFB132Q7Z7B7 95 aa17.83■□□□□ 0.44
SGCA-202ENST00000344627 ACEP12821 1306 aa17.82■□□□□ 0.44
SGCA-202ENST00000344627 SPATA31A1Q5TZJ5 1347 aa17.81■□□□□ 0.44
SGCA-202ENST00000344627 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
SGCA-202ENST00000344627 BRWD3Q6RI45 1802 aa17.81■□□□□ 0.44
SGCA-202ENST00000344627 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
SGCA-202ENST00000344627 CPDO75976 1380 aa17.8■□□□□ 0.44
SGCA-202ENST00000344627 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
SGCA-202ENST00000344627 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
SGCA-202ENST00000344627 FAM196AQ6ZSG2 479 aa17.8■□□□□ 0.44
SGCA-202ENST00000344627 BARGINQ6ZT62 677 aa17.8■□□□□ 0.44
SGCA-202ENST00000344627 ABTB2Q8N961 1025 aa17.8■□□□□ 0.44
SGCA-202ENST00000344627 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
SGCA-202ENST00000344627 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
SGCA-202ENST00000344627 EVA1CP58658 441 aa17.79■□□□□ 0.44
SGCA-202ENST00000344627 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
SGCA-202ENST00000344627 CRYBG1Q9Y4K1 1723 aa17.78■□□□□ 0.44
SGCA-202ENST00000344627 USP19O94966 1318 aa17.76■□□□□ 0.43
SGCA-202ENST00000344627 NUTM2GQ5VZR2 741 aa17.76■□□□□ 0.43
SGCA-202ENST00000344627 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
SGCA-202ENST00000344627 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
SGCA-202ENST00000344627 ZC3H6P61129 1189 aaKnown RBP17.75■□□□□ 0.43
SGCA-202ENST00000344627 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
SGCA-202ENST00000344627 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
SGCA-202ENST00000344627 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
SGCA-202ENST00000344627 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
SGCA-202ENST00000344627 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
SGCA-202ENST00000344627 SSH2Q76I76 1423 aa17.73■□□□□ 0.43
SGCA-202ENST00000344627 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
SGCA-202ENST00000344627 GCP02774 474 aa17.73■□□□□ 0.43
SGCA-202ENST00000344627 CHRNA2Q15822 529 aa17.73■□□□□ 0.43
SGCA-202ENST00000344627 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
SGCA-202ENST00000344627 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
SGCA-202ENST00000344627 ROCK2O75116 1388 aaKnown RBP17.73■□□□□ 0.43
SGCA-202ENST00000344627 QRICH2Q9H0J4 1663 aa17.73■□□□□ 0.43
SGCA-202ENST00000344627 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
SGCA-202ENST00000344627 LRP5O75197 1615 aa17.72■□□□□ 0.43
SGCA-202ENST00000344627 EN1Q05925 392 aaPredicted RBP17.71■□□□□ 0.43
SGCA-202ENST00000344627 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
SGCA-202ENST00000344627 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
SGCA-202ENST00000344627 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
SGCA-202ENST00000344627 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
SGCA-202ENST00000344627 USP6P35125 1406 aa17.68■□□□□ 0.42
SGCA-202ENST00000344627 KCNH5Q8NCM2 988 aa17.68■□□□□ 0.42
SGCA-202ENST00000344627 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
SGCA-202ENST00000344627 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
SGCA-202ENST00000344627 NLRP6P59044 892 aa17.67■□□□□ 0.42
SGCA-202ENST00000344627 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
SGCA-202ENST00000344627 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
SGCA-202ENST00000344627 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
SGCA-202ENST00000344627 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 CRB1P82279 1406 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 TRIM37O94972 964 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 APBA3O96018 575 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
SGCA-202ENST00000344627 LMO7Q8WWI1 1683 aa17.65■□□□□ 0.42
SGCA-202ENST00000344627 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
SGCA-202ENST00000344627 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
SGCA-202ENST00000344627 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
SGCA-202ENST00000344627 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
SGCA-202ENST00000344627 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
SGCA-202ENST00000344627 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
SGCA-202ENST00000344627 SLIT3O75094 1523 aa17.63■□□□□ 0.41
SGCA-202ENST00000344627 PSDA5PKW4 1024 aaPredicted RBP17.63■□□□□ 0.41
SGCA-202ENST00000344627 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
SGCA-202ENST00000344627 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
SGCA-202ENST00000344627 SBNO2Q9Y2G9 1366 aa17.61■□□□□ 0.41
SGCA-202ENST00000344627 OVOS2A0A0G2JMS6 1433 aa17.6■□□□□ 0.41
SGCA-202ENST00000344627 OVOS2A0A0J9YW53 1432 aa17.6■□□□□ 0.41
SGCA-202ENST00000344627 OVOS2Q6IE36 1432 aa17.6■□□□□ 0.41
SGCA-202ENST00000344627 BCL9O00512 1426 aa17.59■□□□□ 0.41
SGCA-202ENST00000344627 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
SGCA-202ENST00000344627 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
SGCA-202ENST00000344627 PLSCR1O15162 318 aa17.59■□□□□ 0.41
SGCA-202ENST00000344627 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms