RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 CD163L1Q9NR16 1453 aa29.4■■■□□ 2.3
NKX2-3-201ENST00000344586 TBC1D2Q9BYX2 928 aa29.4■■■□□ 2.3
NKX2-3-201ENST00000344586 SRPK2P78362 688 aaKnown RBP29.39■■■□□ 2.3
NKX2-3-201ENST00000344586 IDI1Q13907 227 aa29.38■■■□□ 2.29
NKX2-3-201ENST00000344586 SSH1Q8WYL5 1049 aa29.38■■■□□ 2.29
NKX2-3-201ENST00000344586 NEO1Q92859 1461 aa29.38■■■□□ 2.29
NKX2-3-201ENST00000344586 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
NKX2-3-201ENST00000344586 HDAC1Q13547 482 aaPredicted RBP29.37■■■□□ 2.29
NKX2-3-201ENST00000344586 STK26Q9P289 416 aa29.37■■■□□ 2.29
NKX2-3-201ENST00000344586 IL16Q14005 1332 aa29.37■■■□□ 2.29
NKX2-3-201ENST00000344586 ATAD2Q6PL18 1390 aa29.37■■■□□ 2.29
NKX2-3-201ENST00000344586 RAPGEF3O95398 923 aa29.36■■■□□ 2.29
NKX2-3-201ENST00000344586 POGKQ9P215 609 aa29.36■■■□□ 2.29
NKX2-3-201ENST00000344586 ATF7IPQ6VMQ6 1270 aa29.35■■■□□ 2.29
NKX2-3-201ENST00000344586 DDX19BQ9UMR2 479 aa29.35■■■□□ 2.29
NKX2-3-201ENST00000344586 TMEM131LA2VDJ0 1609 aa29.34■■■□□ 2.29
NKX2-3-201ENST00000344586 FYB1O15117 783 aa29.34■■■□□ 2.29
NKX2-3-201ENST00000344586 ITPRIPQ8IWB1 547 aa29.33■■■□□ 2.29
NKX2-3-201ENST00000344586 ANO8Q9HCE9 1232 aaPredicted RBP29.32■■■□□ 2.28
NKX2-3-201ENST00000344586 TERF2IPQ9NYB0 399 aa29.31■■■□□ 2.28
NKX2-3-201ENST00000344586 NOB1Q9ULX3 412 aaKnown RBP29.31■■■□□ 2.28
NKX2-3-201ENST00000344586 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
NKX2-3-201ENST00000344586 SLC52A1Q9NWF4 448 aa29.3■■■□□ 2.28
NKX2-3-201ENST00000344586 MINK1Q8N4C8 1332 aaPredicted RBP29.3■■■□□ 2.28
NKX2-3-201ENST00000344586 PNPLA6Q8IY17 1366 aa29.3■■■□□ 2.28
NKX2-3-201ENST00000344586 RICTORQ6R327 1708 aa29.29■■■□□ 2.28
NKX2-3-201ENST00000344586 YTHDC2Q9H6S0 1430 aaKnown RBP29.29■■■□□ 2.28
NKX2-3-201ENST00000344586 SENP3Q9H4L4 574 aaPredicted RBP29.29■■■□□ 2.28
NKX2-3-201ENST00000344586 CDC42BPGQ6DT37 1551 aa29.29■■■□□ 2.28
NKX2-3-201ENST00000344586 PRAM1Q96QH2 718 aa29.29■■■□□ 2.28
NKX2-3-201ENST00000344586 KIF20BQ96Q89 1820 aa29.28■■■□□ 2.28
NKX2-3-201ENST00000344586 RIPK4P57078 832 aa29.28■■■□□ 2.28
NKX2-3-201ENST00000344586 SMC5Q8IY18 1101 aa29.28■■■□□ 2.28
NKX2-3-201ENST00000344586 TMEM57Q8N5G2 664 aa29.27■■■□□ 2.28
NKX2-3-201ENST00000344586 LRRC7Q96NW7 1537 aa29.26■■■□□ 2.27
NKX2-3-201ENST00000344586 DIAPH1O60610 1272 aaKnown RBP29.26■■■□□ 2.27
NKX2-3-201ENST00000344586 C22orf23Q9BZE7 217 aa29.26■■■□□ 2.27
NKX2-3-201ENST00000344586 ZBTB40Q9NUA8 1239 aa29.25■■■□□ 2.27
NKX2-3-201ENST00000344586 KIF16BQ96L93 1317 aa29.24■■■□□ 2.27
NKX2-3-201ENST00000344586 MFAP1P55081 439 aaKnown RBP29.24■■■□□ 2.27
NKX2-3-201ENST00000344586 OSCARQ8IYS5 282 aa29.24■■■□□ 2.27
NKX2-3-201ENST00000344586 ARHGEF40Q8TER5 1519 aa29.23■■■□□ 2.27
NKX2-3-201ENST00000344586 YEATS2Q9ULM3 1422 aa29.23■■■□□ 2.27
NKX2-3-201ENST00000344586 ALKQ9UM73 1620 aa29.21■■■□□ 2.27
NKX2-3-201ENST00000344586 HDGFL2Q7Z4V5 671 aaPredicted RBP29.2■■■□□ 2.26
NKX2-3-201ENST00000344586 PNNQ9H307 717 aaKnown RBP29.2■■■□□ 2.26
NKX2-3-201ENST00000344586 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
NKX2-3-201ENST00000344586 ALDH1L2Q3SY69 923 aa29.19■■■□□ 2.26
NKX2-3-201ENST00000344586 IPO8O15397 1037 aaKnown RBP29.19■■■□□ 2.26
NKX2-3-201ENST00000344586 SPRYD3Q8NCJ5 442 aa29.17■■■□□ 2.26
NKX2-3-201ENST00000344586 CDK19Q9BWU1 502 aa29.17■■■□□ 2.26
NKX2-3-201ENST00000344586 NUCB1Q02818 461 aa29.16■■■□□ 2.26
NKX2-3-201ENST00000344586 PPIP5K1Q6PFW1 1433 aa29.16■■■□□ 2.26
NKX2-3-201ENST00000344586 FCHSD2O94868 740 aa29.16■■■□□ 2.26
NKX2-3-201ENST00000344586 RSPH6AQ9H0K4 717 aa29.15■■■□□ 2.26
NKX2-3-201ENST00000344586 CABP1Q9NZU7 370 aa29.15■■■□□ 2.26
NKX2-3-201ENST00000344586 FAM43AQ8N2R8 423 aa29.13■■■□□ 2.25
NKX2-3-201ENST00000344586 MCM4P33991 863 aa29.13■■■□□ 2.25
NKX2-3-201ENST00000344586 PRKAR2BP31323 418 aa29.12■■■□□ 2.25
NKX2-3-201ENST00000344586 BRPF1P55201 1214 aaPredicted RBP29.12■■■□□ 2.25
NKX2-3-201ENST00000344586 CHMP5Q9NZZ3 219 aa29.12■■■□□ 2.25
NKX2-3-201ENST00000344586 L1TD1Q5T7N2 865 aaKnown RBP29.11■■■□□ 2.25
NKX2-3-201ENST00000344586 ATP7BP35670 1465 aa29.1■■■□□ 2.25
NKX2-3-201ENST00000344586 LNPKQ9C0E8 428 aa29.09■■■□□ 2.25
NKX2-3-201ENST00000344586 NCOA3Q9Y6Q9 1424 aa29.09■■■□□ 2.25
NKX2-3-201ENST00000344586 ZNF428Q96B54 188 aa29.09■■■□□ 2.25
NKX2-3-201ENST00000344586 POLKQ9UBT6 870 aa29.09■■■□□ 2.25
NKX2-3-201ENST00000344586 CHD1LQ86WJ1 897 aa29.08■■■□□ 2.25
NKX2-3-201ENST00000344586 RBM25P49756 843 aaKnown RBP29.08■■■□□ 2.25
NKX2-3-201ENST00000344586 HSCBQ8IWL3 235 aa29.08■■■□□ 2.25
NKX2-3-201ENST00000344586 DLC1Q96QB1 1528 aa29.07■■■□□ 2.24
NKX2-3-201ENST00000344586 FBXO31Q5XUX0 539 aaPredicted RBP29.07■■■□□ 2.24
NKX2-3-201ENST00000344586 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.07■■■□□ 2.24
NKX2-3-201ENST00000344586 PTCH1Q13635 1447 aa29.07■■■□□ 2.24
NKX2-3-201ENST00000344586 PIK3R4Q99570 1358 aa29.06■■■□□ 2.24
NKX2-3-201ENST00000344586 ZNF692Q9BU19 519 aaPredicted RBP29.06■■■□□ 2.24
NKX2-3-201ENST00000344586 FBLN1P23142 703 aa29.06■■■□□ 2.24
NKX2-3-201ENST00000344586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.06■■■□□ 2.24
NKX2-3-201ENST00000344586 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
NKX2-3-201ENST00000344586 PHACTR3Q96KR7 559 aa29.05■■■□□ 2.24
NKX2-3-201ENST00000344586 ZBTB7BO15156 539 aaPredicted RBP29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 MRPL50Q8N5N7 158 aaKnown RBP29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 RIMBP3CA6NJZ7 1639 aa29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 RIMBP3BA6NNM3 1639 aa29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 RIMBP3Q9UFD9 1639 aa29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 VAMP4O75379 141 aa29.03■■■□□ 2.24
NKX2-3-201ENST00000344586 SETD1AO15047 1707 aaKnown RBP29.02■■■□□ 2.24
NKX2-3-201ENST00000344586 FSD2A1L4K1 749 aa29.02■■■□□ 2.24
NKX2-3-201ENST00000344586 DDIT3P35638 169 aa29.02■■■□□ 2.24
NKX2-3-201ENST00000344586 BMP2KLQ5H9B9 411 aa29.02■■■□□ 2.24
NKX2-3-201ENST00000344586 THUMPD2Q9BTF0 503 aaKnown RBP29.02■■■□□ 2.24
NKX2-3-201ENST00000344586 ARHGAP45Q92619 1136 aa29.01■■■□□ 2.23
NKX2-3-201ENST00000344586 SNX21Q969T3 373 aa29.01■■■□□ 2.23
NKX2-3-201ENST00000344586 MAP2P11137 1827 aaKnown RBP29.01■■■□□ 2.23
NKX2-3-201ENST00000344586 HMOX1P09601 288 aa29■■■□□ 2.23
NKX2-3-201ENST00000344586 TSPYL6Q8N831 410 aa28.99■■■□□ 2.23
NKX2-3-201ENST00000344586 CDK12Q9NYV4 1490 aaPredicted RBP28.98■■■□□ 2.23
NKX2-3-201ENST00000344586 GCC1Q96CN9 775 aa28.98■■■□□ 2.23
NKX2-3-201ENST00000344586 IFT57Q9NWB7 429 aa28.98■■■□□ 2.23
NKX2-3-201ENST00000344586 CALD1Q05682 793 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms