RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PLEKHG5O94827 1062 aa19.09■□□□□ 0.65
HERPUD1-202ENST00000344114 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
HERPUD1-202ENST00000344114 ADGRB1O14514 1584 aa19.09■□□□□ 0.65
HERPUD1-202ENST00000344114 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.65
HERPUD1-202ENST00000344114 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.65
HERPUD1-202ENST00000344114 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.65
HERPUD1-202ENST00000344114 BTG4Q9NY30 223 aa19.07■□□□□ 0.64
HERPUD1-202ENST00000344114 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
HERPUD1-202ENST00000344114 PSDA5PKW4 1024 aaPredicted RBP19.06■□□□□ 0.64
HERPUD1-202ENST00000344114 TULP4Q9NRJ4 1543 aa19.06■□□□□ 0.64
HERPUD1-202ENST00000344114 A0A0G2JS52 829 aa19.06■□□□□ 0.64
HERPUD1-202ENST00000344114 MYT1Q01538 1121 aa19.06■□□□□ 0.64
HERPUD1-202ENST00000344114 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
HERPUD1-202ENST00000344114 POGKQ9P215 609 aa19.05■□□□□ 0.64
HERPUD1-202ENST00000344114 SPATA31A5Q5VU36 1347 aa19.04■□□□□ 0.64
HERPUD1-202ENST00000344114 SPATA31A7Q8IWB4 1347 aa19.04■□□□□ 0.64
HERPUD1-202ENST00000344114 GPRASP1Q5JY77 1395 aa19.04■□□□□ 0.64
HERPUD1-202ENST00000344114 PRR36Q9H6K5 1346 aa19.03■□□□□ 0.64
HERPUD1-202ENST00000344114 EIF3AQ14152 1382 aaKnown RBP19.03■□□□□ 0.64
HERPUD1-202ENST00000344114 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
HERPUD1-202ENST00000344114 ITSN1Q15811 1721 aa19.01■□□□□ 0.63
HERPUD1-202ENST00000344114 PHRF1Q9P1Y6 1649 aaKnown RBP19■□□□□ 0.63
HERPUD1-202ENST00000344114 FAM182BQ5T319 152 aa19■□□□□ 0.63
HERPUD1-202ENST00000344114 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
HERPUD1-202ENST00000344114 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
HERPUD1-202ENST00000344114 RREB1Q92766 1687 aa18.97■□□□□ 0.63
HERPUD1-202ENST00000344114 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-202ENST00000344114 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
HERPUD1-202ENST00000344114 ARHGEF28Q8N1W1 1705 aaKnown RBP18.97■□□□□ 0.63
HERPUD1-202ENST00000344114 MINK1Q8N4C8 1332 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-202ENST00000344114 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
HERPUD1-202ENST00000344114 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
HERPUD1-202ENST00000344114 PRDM11Q9NQV5 511 aa18.95■□□□□ 0.62
HERPUD1-202ENST00000344114 SPATA31A1Q5TZJ5 1347 aa18.95■□□□□ 0.62
HERPUD1-202ENST00000344114 ATP7BP35670 1465 aa18.95■□□□□ 0.62
HERPUD1-202ENST00000344114 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
HERPUD1-202ENST00000344114 NGDNQ8NEJ9 315 aaKnown RBP18.93■□□□□ 0.62
HERPUD1-202ENST00000344114 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
HERPUD1-202ENST00000344114 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
HERPUD1-202ENST00000344114 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
HERPUD1-202ENST00000344114 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
HERPUD1-202ENST00000344114 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-202ENST00000344114 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
HERPUD1-202ENST00000344114 KIAA1210Q9ULL0 1709 aa18.9■□□□□ 0.62
HERPUD1-202ENST00000344114 TRIM37O94972 964 aa18.9■□□□□ 0.62
HERPUD1-202ENST00000344114 NBPF8Q3BBV2 869 aa18.9■□□□□ 0.62
HERPUD1-202ENST00000344114 LMO7Q8WWI1 1683 aa18.9■□□□□ 0.62
HERPUD1-202ENST00000344114 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.62
HERPUD1-202ENST00000344114 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
HERPUD1-202ENST00000344114 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
HERPUD1-202ENST00000344114 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
HERPUD1-202ENST00000344114 POLR3AO14802 1390 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-202ENST00000344114 BARGINQ6ZT62 677 aa18.87■□□□□ 0.61
HERPUD1-202ENST00000344114 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
HERPUD1-202ENST00000344114 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
HERPUD1-202ENST00000344114 APBA3O96018 575 aa18.86■□□□□ 0.61
HERPUD1-202ENST00000344114 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
HERPUD1-202ENST00000344114 DCAF11Q8TEB1 546 aa18.86■□□□□ 0.61
HERPUD1-202ENST00000344114 CAMTA1Q9Y6Y1 1673 aa18.86■□□□□ 0.61
HERPUD1-202ENST00000344114 PARP4Q9UKK3 1724 aaKnown RBP18.85■□□□□ 0.61
HERPUD1-202ENST00000344114 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
HERPUD1-202ENST00000344114 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
HERPUD1-202ENST00000344114 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-202ENST00000344114 CPDO75976 1380 aa18.82■□□□□ 0.6
HERPUD1-202ENST00000344114 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 USP35Q9P2H5 1018 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 USP19O94966 1318 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 ACEP12821 1306 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
HERPUD1-202ENST00000344114 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
HERPUD1-202ENST00000344114 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
HERPUD1-202ENST00000344114 EVA1CP58658 441 aa18.8■□□□□ 0.6
HERPUD1-202ENST00000344114 LARP1Q6PKG0 1096 aaKnown RBP18.8■□□□□ 0.6
HERPUD1-202ENST00000344114 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
HERPUD1-202ENST00000344114 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
HERPUD1-202ENST00000344114 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-202ENST00000344114 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
HERPUD1-202ENST00000344114 NBPF14Q5TI25 921 aa18.78■□□□□ 0.6
HERPUD1-202ENST00000344114 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
HERPUD1-202ENST00000344114 USP47Q96K76 1375 aa18.77■□□□□ 0.6
HERPUD1-202ENST00000344114 ABTB2Q8N961 1025 aa18.76■□□□□ 0.59
HERPUD1-202ENST00000344114 LRRC37A3O60309 1634 aa18.76■□□□□ 0.59
HERPUD1-202ENST00000344114 WNK3Q9BYP7 1800 aa18.75■□□□□ 0.59
HERPUD1-202ENST00000344114 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
HERPUD1-202ENST00000344114 C11orf95C9JLR9 678 aaPredicted RBP18.74■□□□□ 0.59
HERPUD1-202ENST00000344114 YY1P25490 414 aa18.74■□□□□ 0.59
HERPUD1-202ENST00000344114 CASZ1Q86V15 1759 aa18.74■□□□□ 0.59
HERPUD1-202ENST00000344114 CRB1P82279 1406 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 GCP02774 474 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 MIER1Q8N108 512 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 SPON1Q9HCB6 807 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 OVOS2A0A0G2JMS6 1433 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
HERPUD1-202ENST00000344114 KCNQ2O43526 872 aa18.72■□□□□ 0.59
HERPUD1-202ENST00000344114 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms